RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ATG9AQ7Z3C6 839 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 ADGRA1Q86SQ6 560 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 ISCA2Q86U28 154 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 Q8N377 158 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 OR14L1PQ8NHC6 308 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 SOSTQ9BQB4 213 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 LRRC61Q9BV99 259 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 RAB11FIP5Q9BXF6 653 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC25A18Q9H1K4 315 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 LTB4R2Q9NPC1 389 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 ITM2CQ9NQX7 267 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 GPR83Q9NYM4 423 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 LIMA1Q9UHB6 759 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 FAM237AA0A1B0GTK4 181 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 C1orf226A1L170 272 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 C15orf62A8K5M9 175 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 CSPG5O95196 566 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 HOXB5P09067 269 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 DUX4L4P0CJ87 422 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 UBA1P22314 1058 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 HOXC9P31274 260 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 CDAP32320 146 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 CD81P60033 236 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 NECTIN1Q15223 517 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 PDCD2Q16342 344 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 C2CD6Q53TS8 623 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 Q6ZR54 194 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 LRRC8DQ7L1W4 858 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC16A9Q7RTY1 509 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 PTOV1Q86YD1 416 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 ZNF843Q8N446 348 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 OR2T12Q8NG77 320 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 SEMA4DQ92854 862 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 P2RY12Q9H244 342 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 KIF9Q9HAQ2 790 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC6A13Q9NSD5 602 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 COQ3Q9NZJ6 369 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 EPHA6Q9UF33 1036 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 RARRES3Q9UL19 164 aa2.3□□□□□ -2.04
ECHDC1-219ENST00000526299 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 COL4A4P53420 1690 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 TTC36A6NLP5 189 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 LRRC53A6NM62 1247 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 ZNF197O14709 1029 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 GPR137BO60478 399 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 IL7RP16871 459 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 PGFP49763 221 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 CDH11P55287 796 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 ARL4CP56559 192 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 TRA2BP62995 288 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 DCTN2Q13561 401 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 PDE1CQ14123 709 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 TEAD2Q15562 447 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 ANO1Q5XXA6 986 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 BBS12Q6ZW61 710 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 FASTKD5Q7L8L6 764 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 PLD3Q8IV08 490 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC34A3Q8N130 599 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 DNAJC22Q8N4W6 341 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC5A8Q8N695 610 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 EMC1Q8N766 993 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 PPP4R1Q8TF05 950 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 RASL10AQ92737 203 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 TBC1D20Q96BZ9 403 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 KIF1BPQ96EK5 621 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 PYM1Q9BRP8 204 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC25A10Q9UBX3 287 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 STK39Q9UEW8 545 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 YIPF1Q9Y548 306 aa2.29□□□□□ -2.04
ECHDC1-219ENST00000526299 IGLV9-49A0A0B4J1Y8 123 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 OR6C76A6NM76 312 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 EIF4E1BA6NMX2 242 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 CDC123O75794 336 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 ZNF182P17025 639 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 ELAVL2Q12926 359 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 EFR3AQ14156 821 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 GSTA3Q16772 222 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 SGSM1Q2NKQ1 1148 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 ALG11Q2TAA5 492 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 FBXO47Q5MNV8 452 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 MAP3K21Q5TCX8 1036 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 LCN10Q6JVE6 187 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC39A11Q8N1S5 342 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 ZCCHC10Q8TBK6 192 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 RRNAD1Q96FB5 475 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC47A1Q96FL8 570 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 CLEC7AQ9BXN2 247 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 PCGF6Q9BYE7 350 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 ZNF700Q9H0M5 742 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 SIL1Q9H173 461 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 UPF3AQ9H1J1 476 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 CHST11Q9NPF2 352 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 INTS9Q9NV88 658 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 HAO1Q9UJM8 370 aa2.28□□□□□ -2.04
ECHDC1-219ENST00000526299 IGKV6D-21A0A0A0MT36 114 aa2.27□□□□□ -2.05
ECHDC1-219ENST00000526299 IGHV4-61A0A0C4DH41 118 aa2.27□□□□□ -2.05
ECHDC1-219ENST00000526299 TEX13DA0A0J9YY54 714 aaPredicted RBP2.27□□□□□ -2.05
ECHDC1-219ENST00000526299 KPNA7A9QM74 516 aa2.27□□□□□ -2.05
ECHDC1-219ENST00000526299 IGHV4-59P01825 116 aa2.27□□□□□ -2.05
ECHDC1-219ENST00000526299 UGT1A4P22310 534 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms