RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-201ENST00000526271 TRAM1L1Q8N609 369 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 SLC38A9Q8NBW4 561 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 SPATA22Q8NHS9 363 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 IMP4Q96G21 291 aaKnown RBP14.01□□□□□ -0.17
CPSF1-201ENST00000526271 SLC41A2Q96JW4 573 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 ZFYVE1Q9HBF4 777 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 EPHA6Q9UF33 1036 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 DNPEPQ9ULA0 475 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 POLHQ9Y253 713 aa14.01□□□□□ -0.17
CPSF1-201ENST00000526271 GAPDHSO14556 408 aaPredicted RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 TOX3O15405 576 aaPredicted RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 RFPL1O75677 317 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 SORBS2O94875 1100 aaKnown RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 PROSCO94903 275 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 MT-CYBP00156 380 aaPredicted RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 SERPINC1P01008 464 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 VIPP01282 170 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 NTRK1P04629 796 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 IL11RAQ14626 422 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
CPSF1-201ENST00000526271 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 ATP13A5Q4VNC0 1218 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 CCDC122Q5T0U0 273 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 PRAMEF17Q5VTA0 474 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 AGAP9Q5VTM2 703 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 CACHD1Q5VU97 1274 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 SARM1Q6SZW1 724 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 WASH2PQ6VEQ5 465 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 MICALCLQ6ZW33 695 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 ADAMTS17Q8TE56 1095 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 NAT14Q8WUY8 206 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 OLFM3Q96PB7 478 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 RNF157Q96PX1 679 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 NRTNQ99748 197 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 TIMM29Q9BSF4 260 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 RAB33BQ9H082 229 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 ACTL8Q9H568 366 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 STN1Q9H668 368 aaKnown RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 BPIFA1Q9NP55 256 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 WASH6PQ9NQA3 447 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 LNPEPQ9UIQ6 1025 aa14□□□□□ -0.17
CPSF1-201ENST00000526271 TEP1Q99973 2627 aaKnown RBP14□□□□□ -0.17
CPSF1-201ENST00000526271 ABCA12Q86UK0 2595 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 PDZK1P1A8MUH7 402 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 SLC4A1P02730 911 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 EBLN1P0CF75 366 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 SLC2A4P14672 509 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 KDELR1P24390 212 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 MAN1A1P33908 653 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 CD68P34810 354 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-201ENST00000526271 NOP2P46087 812 aaKnown RBP13.99□□□□□ -0.17
CPSF1-201ENST00000526271 UBASH3AP57075 661 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 INSCQ1MX18 579 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 C4orf17Q53FE4 359 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 ZNF517Q6ZMY9 492 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-201ENST00000526271 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 RASGRP3Q8IV61 690 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 TTC30BQ8N4P2 665 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 TEX19Q8NA77 164 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 Q8NA96 180 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 STAMBPL1Q96FJ0 436 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 MAP3K3Q99759 626 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 ZSCAN5AQ9BUG6 496 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 TWSG1Q9GZX9 223 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 MAGEE1Q9HCI5 957 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 POT1Q9NUX5 634 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 PIKFYVEQ9Y2I7 2098 aa13.99□□□□□ -0.17
CPSF1-201ENST00000526271 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 GPR89AB7ZAQ6 455 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 MKRN2OSH3BPM6 223 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 MYO1FO00160 1098 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 KMOO15229 486 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 SNRNP200O75643 2136 aaKnown RBP13.98□□□□□ -0.17
CPSF1-201ENST00000526271 RASSF9O75901 435 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 CAPN1P07384 714 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 GPR89BP0CG08 455 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 AMD1P17707 334 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 GPS2Q13227 327 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 SEPT6Q14141 434 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 PDK2Q15119 407 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 RPE65Q16518 533 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 PCSK7Q16549 785 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 SLC9A4Q6AI14 798 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 IRGCQ6NXR0 463 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 DUS1LQ6P1R4 473 aaKnown RBP13.98□□□□□ -0.17
CPSF1-201ENST00000526271 ALKBH5Q6P6C2 394 aaKnown RBP13.98□□□□□ -0.17
CPSF1-201ENST00000526271 RASGEF1AQ8N9B8 481 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 KCTD6Q8NC69 237 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 CCHCR1Q8TD31 782 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 IFNKQ9P0W0 207 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 PLEKHB1Q9UF11 243 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-201ENST00000526271 PADI1Q9ULC6 663 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 MAP4K5Q9Y4K4 846 aa13.98□□□□□ -0.17
CPSF1-201ENST00000526271 MDC1Q14676 2089 aaKnown RBP13.98□□□□□ -0.17
CPSF1-201ENST00000526271 A0A1W2PQJ5 194 aa13.97□□□□□ -0.17
CPSF1-201ENST00000526271 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms