RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CTSCP53634 463 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 CRADDP78560 199 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 TCEA2Q15560 299 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 DBN1Q16643 649 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 WHAMMP3Q1A5X7 153 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 INSCQ1MX18 579 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 CDCP2Q5VXM1 449 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 KIAA0930Q6ICG6 404 aaPredicted RBP16.99■□□□□ 0.31
LMX1B-203ENST00000526117 IYDQ6PHW0 289 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 TMEM220Q6QAJ8 160 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 CRTC3Q6UUV7 619 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 EFL1Q7Z2Z2 1120 aaKnown RBP16.99■□□□□ 0.31
LMX1B-203ENST00000526117 TMEM135Q86UB9 458 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 AMZ2Q86W34 360 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 PNPLA1Q8N8W4 532 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 OR2L2Q8NH16 312 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 KRT12Q99456 494 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 KLC4Q9NSK0 619 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 SAMD15Q9P1V8 674 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 GULP1Q9UBP9 304 aa16.99■□□□□ 0.31
LMX1B-203ENST00000526117 OPA1O60313 960 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 AVILO75366 819 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 SEC31AO94979 1220 aaKnown RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 PAMP19021 973 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 CDKN1CP49918 316 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 INSM1Q01101 510 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 CLPPQ16740 277 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 IZUMO3Q5VZ72 239 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 DHRS13Q6UX07 377 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 ARL14Q8N4G2 192 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 GRAMD1AQ96CP6 724 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 SNF8Q96H20 258 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 SIGLEC10Q96LC7 697 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 CCDC3Q9BQI4 270 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 VPS37BQ9H9H4 285 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 SARS2Q9NP81 518 aaKnown RBP16.98■□□□□ 0.31
LMX1B-203ENST00000526117 SIRPGQ9P1W8 387 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 KCNK6Q9Y257 313 aa16.98■□□□□ 0.31
LMX1B-203ENST00000526117 COL27A1Q8IZC6 1860 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 CCDC78A2IDD5 438 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 MGAT4DA6NG13 374 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 OR2AG2A6NM03 316 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 NTN3O00634 580 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 TP73O15350 636 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 ZW10O43264 779 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 POP7O75817 140 aaKnown RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 USP1O94782 785 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 MYF5P13349 255 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 XRCC1P18887 633 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 IDSP22304 550 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 ARNTP27540 789 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 NMBRP28336 390 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 ARCN1P48444 511 aaKnown RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 TTPAP49638 278 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 FOXC1Q12948 553 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 KCTD19Q17RG1 926 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 ZNF658BQ4V348 819 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 FASTKD1Q53R41 847 aaKnown RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 PERM1Q5SV97 790 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 FNBP1LQ5T0N5 605 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-203ENST00000526117 METRNLQ641Q3 311 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 TAS2R42Q7RTR8 314 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 CHCHD4Q8N4Q1 142 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 DCBLD1Q8N8Z6 715 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 BBOF1Q8ND07 529 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 GPR150Q8NGU9 434 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 OR6P1Q8NGX9 317 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 MAPK15Q8TD08 544 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 SLC37A2Q8TED4 501 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 CCDC74AQ96AQ1 378 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 LRRC39Q96DD0 335 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 MFSD3Q96ES6 412 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 SGF29Q96ES7 293 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 NAT9Q9BTE0 207 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 FAM96AQ9H5X1 160 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 UCK1Q9HA47 277 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 CATSPERZQ9NTU4 200 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 LRIT1Q9P2V4 623 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 RNF215Q9Y6U7 377 aa16.97■□□□□ 0.31
LMX1B-203ENST00000526117 NCOR2Q9Y618 2525 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 CPED1A4D0V7 1026 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 OR51F1A6NGY5 319 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 F8W8V4 182 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-203ENST00000526117 EML2O95834 649 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 PRSS56P0CW18 603 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 DNAJC21Q5F1R6 531 aaKnown RBP16.96■□□□□ 0.31
LMX1B-203ENST00000526117 CCNJLQ8IV13 435 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 RBM12BQ8IXT5 1001 aaKnown RBP16.96■□□□□ 0.31
LMX1B-203ENST00000526117 AGGF1Q8N302 714 aaeCLIP16.96■□□□□ 0.31
LMX1B-203ENST00000526117 HM13Q8TCT9 377 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 TCF12Q99081 682 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 ERP44Q9BS26 406 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 TRIM51Q9BSJ1 452 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 SCNM1Q9BWG6 230 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms