RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 OSER1Q9NX31 292 aa18.03■□□□□ 0.48
PCDHB18P-201ENST00000524813 EVLQ9UI08 416 aaPredicted RBP18.03■□□□□ 0.48
PCDHB18P-201ENST00000524813 RNF112Q9ULX5 631 aa18.03■□□□□ 0.48
PCDHB18P-201ENST00000524813 TSC22D4Q9Y3Q8 395 aa18.03■□□□□ 0.48
PCDHB18P-201ENST00000524813 SNX5Q9Y5X3 404 aa18.03■□□□□ 0.48
PCDHB18P-201ENST00000524813 NOBOXO60393 691 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 GLP2RO95838 553 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 MOCS2O96007 188 aaPredicted RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 GOT2P00505 430 aaKnown RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 ANXA6P08133 673 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 PIGAP37287 484 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 MTPNP58546 118 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 IFITM3Q01628 133 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 EIF4EBP2Q13542 120 aaPredicted RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 SEMA3AQ14563 771 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 HABP4Q5JVS0 413 aaKnown RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 ANKS6Q68DC2 871 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 C17orf99Q6UX52 265 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 C14orf80Q86SX3 495 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 SYVN1Q86TM6 617 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 ANKRD13BQ86YJ7 626 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 RTL3Q8N8U3 475 aaKnown RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 MYLPFQ96A32 169 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 PPM1MQ96MI6 270 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 TMEM209Q96SK2 561 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 ACOX2Q99424 681 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 PSD2Q9BQI7 771 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 AMBRA1Q9C0C7 1298 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 TSPYL2Q9H2G4 693 aaPredicted RBP18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 FLRT1Q9NZU1 646 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 MIA3Q5JRA6 1907 aa18.02■□□□□ 0.48
PCDHB18P-201ENST00000524813 RBM47A0AV96 593 aaKnown RBP18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 CD3EAPO15446 510 aaKnown RBP18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 LDB2O43679 373 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 MMP2P08253 660 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 SMPD1P17405 629 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 NFKBIAP25963 317 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 SUOXP51687 545 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 GP2P55259 537 aaKnown RBP18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 MAP2K5Q13163 448 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 BCL2A1Q16548 175 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 CCL14Q16627 93 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 XKR7Q5GH72 579 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 BRMS1LQ5PSV4 323 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 ZNF362Q5T0B9 420 aaPredicted RBP18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 ANKRD34AQ69YU3 496 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 IQSEC1Q6DN90 963 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 CASP10Q92851 521 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 HPS1Q92902 700 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 CSNK1G1Q9HCP0 422 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 CDH9Q9ULB4 789 aa18.02■□□□□ 0.47
PCDHB18P-201ENST00000524813 E9PAM4 449 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 PTGES3LE9PB15 166 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 J3KR12 359 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 KERAO60938 352 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ERVK-8P63133 956 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 CD47Q08722 323 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 SLC10A7Q0GE19 358 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 SREBF2Q12772 1141 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 MORN1Q5T089 497 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 SULT1C3Q6IMI6 304 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 LAIR2Q6ISS4 152 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 RBM23Q86U06 439 aaKnown RBP18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 HS3ST5Q8IZT8 346 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 SCAMP5Q8TAC9 235 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 STAG3L4Q8TBR4 150 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 PROKR1Q8TCW9 393 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 BTN2A3PQ96KV6 586 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 HERC2P3Q9BVR0 1158 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 NOL6Q9H6R4 1146 aaKnown RBP18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 CARS2Q9HA77 564 aaKnown RBP18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ZIM2Q9NZV7 527 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 IKZF3Q9UKT9 509 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 CCDC162PA2VCL2 907 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 TMEM88BA6NKF7 163 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 CHEK2O96017 543 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 NPPAP01160 153 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 HTR7P34969 479 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 RENBPP51606 427 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 DNASE1L3Q13609 305 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 DLEU7Q6UYE1 221 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ZFAND4Q86XD8 727 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 FAM86B1Q8N7N1 296 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 S100ZQ8WXG8 99 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 KIAA1191Q96A73 305 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 RDH12Q96NR8 316 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 FEM1AQ9BSK4 669 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 OSBPL10Q9BXB5 764 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 NUSAP1Q9BXS6 441 aaKnown RBP18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 CCDC90BQ9GZT6 254 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ABHD16BQ9H3Z7 469 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 COMMD8Q9NX08 183 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 DNMT3BQ9UBC3 853 aaKnown RBP18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ZNF225Q9UK10 706 aa18.01■□□□□ 0.47
PCDHB18P-201ENST00000524813 ANKRD12Q6UB98 2062 aa18■□□□□ 0.47
PCDHB18P-201ENST00000524813 NCF1BA6NI72 391 aaPredicted RBP18■□□□□ 0.47
PCDHB18P-201ENST00000524813 NCF1CA8MVU1 366 aaPredicted RBP18■□□□□ 0.47
PCDHB18P-201ENST00000524813 NDUFS2O75306 463 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms