RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 LVRNQ6Q4G3 990 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 MAATS1Q7Z4T9 603 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 NAGSQ8N159 534 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 CLDN19Q8N6F1 224 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 ARL10Q8N8L6 244 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 FAM181AQ8N9Y4 354 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 SCG3Q8WXD2 468 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 PEX13Q92968 403 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 WDR83Q9BRX9 315 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 ZCCHC2Q9C0B9 1178 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 CATSPERZQ9NTU4 200 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 GRHL1Q9NZI5 618 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 TBC1D29Q9UFV1 150 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 PADI4Q9UM07 663 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 RPS6KL1Q9Y6S9 549 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 DCHS1Q96JQ0 3298 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 IGLV3-16A0A075B6K0 115 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 FAM237BA0A1B0GVD1 139 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 MED19A0JLT2 244 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 GPR89AB7ZAQ6 455 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 RFPL3O75679 317 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 GPR89BP0CG08 455 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CTAGE8P0CG41 777 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 ACP1P24666 158 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 FOXC1Q12948 553 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 NFE2L1Q14494 772 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 KIAA0930Q6ICG6 404 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 OGFOD3Q6PK18 319 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 DHRS13Q6UX07 377 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CTAGE4Q8IX94 777 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 UNC5BQ8IZJ1 945 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 SDR16C5Q8N3Y7 309 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 LRRN4CLQ8ND94 238 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 GPR156Q8NFN8 814 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 IFI44Q8TCB0 444 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.62□□□□□ -0.397e-6■■■■■ 27.5
VEGFA-224ENST00000523873 TIMM29Q9BSF4 260 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CARD6Q9BX69 1037 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 SCHIP1Q9P0W5 487 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-224ENST00000523873 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 CHMP2BQ9UQN3 213 aa12.62□□□□□ -0.39
VEGFA-224ENST00000523873 ZCWPW2A0A1B0GU75 182 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 PRR19A6NJB7 356 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 RALBP11234 206 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ITGB6P18564 788 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 RPL10P27635 214 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ELK3P41970 407 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ARCN1P48444 511 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 PRLHRP49683 370 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ITIH4Q14624 930 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 BCL7AQ4VC05 210 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 DNAJC21Q5F1R6 531 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 XKR5Q6UX68 686 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 TMEM135Q86UB9 458 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ZNF761Q86XN6 746 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 MARCH9Q86YJ5 346 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ANKMY2Q8IV38 441 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ARL14Q8N4G2 192 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 MMGT1Q8N4V1 131 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 GLMNQ92990 594 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 CCDC74AQ96AQ1 378 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 CFAP36Q96G28 342 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 PLAC1Q9HBJ0 212 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 WHRNQ9P202 907 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 UTP11Q9Y3A2 253 aaKnown RBP12.61□□□□□ -0.39
VEGFA-224ENST00000523873 RNF215Q9Y6U7 377 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 ANKRD12Q6UB98 2062 aa12.61□□□□□ -0.39
VEGFA-224ENST00000523873 PRAMEF33A0A0G2JMD5 474 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 A6NCN8 305 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 HYAL3O43820 417 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 USP1O94782 785 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PGAM1P18669 254 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PAMP19021 973 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SPINK2P20155 84 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 RPIAP49247 311 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms