RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	HMGA1	P17096	107 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	EEF1G	P26641	437 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	RBMS1	P29558	406 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ETV4	P43268	484 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	TNFRSF4	P43489	277 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTNR1B	P49286	362 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	RAD23A	P54725	363 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	SARNP	P82979	210 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	COG7	P83436	770 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	HTD2	P86397	168 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	TOP3A	Q13472	1001 aa	Predicted RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CUL2	Q13617	745 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	EFR3A	Q14156	821 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	NFE2L1	Q14494	772 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	LASP1	Q14847	261 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ME3	Q16798	604 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	IMMT	Q16891	758 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	FILIP1L	Q4L180	1135 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ARHGAP15	Q53QZ3	475 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	LCE3B	Q5TA77	95 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CENPP	Q6IPU0	288 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	NOTUM	Q6P988	496 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	BORA	Q6PGQ7	559 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC2A7	Q6PXP3	512 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	SASS6	Q6UVJ0	657 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PACS1	Q6VY07	963 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	DENND5B	Q6ZUT9	1274 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	LYSMD2	Q8IV50	215 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CARF	Q8N187	725 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	LINC01356	Q8N9X3	169 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATAD1	Q8NBU5	361 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	STKLD1	Q8NE28	680 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	DENND6B	Q8NEG7	585 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ANKRD20A12P	Q8NF67	263 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	TNIP2	Q8NFZ5	429 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	GRK7	Q8WTQ7	553 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	NOC3L	Q8WTT2	800 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRPF31	Q8WWY3	499 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CALML4	Q96GE6	196 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	FAM167A	Q96KS9	214 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	FAM227B	Q96M60	508 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CEP295NL	Q96MC4	621 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PPP1R10	Q96QC0	940 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CYP2S1	Q96SQ9	504 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	GABRG3	Q99928	467 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRDM13	Q9H4Q3	707 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	EPS8L2	Q9H6S3	715 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ERVMER34-1	Q9H9K5	563 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	DNAJC28	Q9NX36	388 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	QPCTL	Q9NXS2	382 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACTR3B	Q9P1U1	418 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	SAE1	Q9UBE0	346 aa	Predicted RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMED5	Q9Y3A6	229 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PCDHA10	Q9Y5I2	948 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	SESN1	Q9Y6P5	492 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A0D9SFI3	127 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTMR11	A4FU01	709 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	HNRNPCL2	B2RXH8	293 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	TCP11X1	B4DZS4	312 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	WASH3P	C4AMC7	463 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	HNRNPCL1	O60812	293 aa	Known RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	PFKFB2	O60825	505 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	DTNB	O60941	627 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	TNFSF15	O95150	251 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	PCDH8	O95206	1070 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	IGLV3-19	P01714	112 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	OSM	P13725	252 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	CD99	P14209	185 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	TGM2	P21980	687 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	KEL	P23276	732 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	NTSR1	P30989	418 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC5A2	P31639	672 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SOX6	P35712	828 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	HSD17B2	P37059	387 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	AVPR1A	P37288	418 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTIF2	P46199	727 aa	Known RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	ETV1	P50549	477 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	TPMT	P51580	245 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF41	P51814	821 aa	Predicted RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC5A3	P53794	718 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SEC24C	P53992	1094 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SESN2	P58004	480 aa	Predicted RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	RPL10A	P62906	217 aa	Known RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	E2F1	Q01094	437 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SRSF2	Q01130	221 aa	Known RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	DEUP1	Q05D60	604 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	LTB	Q06643	244 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	LAMTOR4	Q0VGL1	99 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	KLRB1	Q12918	225 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	PLD1	Q13393	1074 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	DAG1	Q14118	895 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	SPIDR	Q14159	915 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZRSR1	Q15695	479 aa	Known RBP	5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	MAN2A1	Q16706	1144 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	KYNU	Q16719	465 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	C2orf76	Q3KRA6	126 aa		5.16	□□□□□ -1.58
PABPC1-223	ENST00000523636	GLRA4	Q5JXX5	417 aa		5.16	□□□□□ -1.58

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