RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 WDR37Q9Y2I8 494 aa18.39■□□□□ 0.53
SPIDR-220ENST00000522900 AAR2Q9Y312 384 aaKnown RBP18.39■□□□□ 0.53
SPIDR-220ENST00000522900 SLC30A1Q9Y6M5 507 aa18.39■□□□□ 0.53
SPIDR-220ENST00000522900 CAPN6Q9Y6Q1 641 aa18.39■□□□□ 0.53
SPIDR-220ENST00000522900 OR52A4PA6NMU1 304 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 EFCAB7A8K855 629 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 PDZK1P1A8MUH7 402 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 POP7O75817 140 aaKnown RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 STK10O94804 968 aaKnown RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 LIPCP11150 499 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 LPOP22079 712 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 KLF1Q13351 362 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 GTF2H3Q13889 308 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 PRPSAP1Q14558 356 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 TAF1AQ15573 450 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 KIAA1614Q5VZ46 1190 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 ABRAXAS1Q6UWZ7 409 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 MICALCLQ6ZW33 695 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 ARHGAP22Q7Z5H3 698 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 DTX1Q86Y01 620 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 SYCE1Q8N0S2 351 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 UBL4BQ8N7F7 174 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 FAM71DQ8N9W8 422 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 DDHD1Q8NEL9 900 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 ZNF398Q8TD17 642 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 JPH3Q8WXH2 748 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 ART4Q93070 314 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 TTC25Q96NG3 672 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-220ENST00000522900 KLHL3Q9UH77 587 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 B3GALT1Q9Y5Z6 326 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 SCN8AQ9UQD0 1980 aa18.38■□□□□ 0.53
SPIDR-220ENST00000522900 C5orf60A6NFR6 353 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 OR2AG2A6NM03 316 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 EIF4E1BA6NMX2 242 aaKnown RBP18.37■□□□□ 0.53
SPIDR-220ENST00000522900 MIF4GDA9UHW6 222 aaKnown RBP18.37■□□□□ 0.53
SPIDR-220ENST00000522900 PPFIA2O75334 1257 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 C1QL1O75973 258 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 VIPP01282 170 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 TYRP1P17643 537 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 IDSP22304 550 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 EPHA4P54764 986 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 CLCA4Q14CN2 919 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 LDLRAP1Q5SW96 308 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 TMEM220Q6QAJ8 160 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 FAM83HQ6ZRV2 1179 aaPredicted RBP18.37■□□□□ 0.53
SPIDR-220ENST00000522900 TMEM26Q6ZUK4 368 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 VASH2Q86V25 355 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 FAM129CQ86XR2 697 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 KLHDC8BQ8IXV7 354 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 BMPERQ8N8U9 685 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 OR13C4Q8NGS5 318 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 B3GNT4Q9C0J1 378 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 SLC39A1Q9NY26 324 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 FKBPLQ9UIM3 349 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 PCDHGA3Q9Y5H0 932 aa18.37■□□□□ 0.53
SPIDR-220ENST00000522900 LILRA5A6NI73 299 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 C2orf81A6NN90 581 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 ZFC3H1O60293 1989 aaKnown RBP18.36■□□□□ 0.53
SPIDR-220ENST00000522900 METTL18O95568 372 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 PTMAP06454 111 aaKnown RBP18.36■□□□□ 0.53
SPIDR-220ENST00000522900 WT1P19544 449 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-220ENST00000522900 GDF10P55107 478 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 GFERP55789 205 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 TMPRSS15P98073 1019 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 XIAPP98170 497 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 RHDQ02161 417 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 ITGA9Q13797 1035 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 AGAP9Q5VTM2 703 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 WASH2PQ6VEQ5 465 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 DET1Q7L5Y6 550 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 TRIM48Q8IWZ4 208 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 TAB3Q8N5C8 712 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-220ENST00000522900 TTC9Q92623 222 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 UCK1Q9HA47 277 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 SLC40A1Q9NP59 571 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 WASH6PQ9NQA3 447 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 SMOXQ9NWM0 555 aa18.36■□□□□ 0.53
SPIDR-220ENST00000522900 GOLGA6L9A6NEM1 432 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 ERVH48-1M5A8F1 160 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 TK2O00142 265 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 CCL22O00626 93 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 SRP72O76094 671 aaKnown RBP18.35■□□□□ 0.53
SPIDR-220ENST00000522900 PRAMEF1O95521 474 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 PBLDP30039 288 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-220ENST00000522900 NFE2L1Q14494 772 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 PARP6Q2NL67 630 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 ANKS6Q68DC2 871 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 KCTD11Q693B1 232 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 AMZ2Q86W34 360 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 BEND7Q8N7W2 519 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-220ENST00000522900 AVL9Q8NBF6 648 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 TTC13Q8NBP0 860 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 LSM14AQ8ND56 463 aaKnown RBP18.35■□□□□ 0.53
SPIDR-220ENST00000522900 SLC35B2Q8TB61 432 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 SGF29Q96ES7 293 aa18.35■□□□□ 0.53
SPIDR-220ENST00000522900 CTRCQ99895 268 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms