RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ATP1A2P50993 1020 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 GFERP55789 205 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 EIF3EP60228 445 aaKnown RBP20.36■□□□□ 0.85
SDCBP-209ENST00000522243 DCAF12Q5T6F0 453 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 ZDHHC20Q5W0Z9 365 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 C11orf96Q7Z7L8 435 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 ZNF605Q86T29 641 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 RASGEF1AQ8N9B8 481 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 AVL9Q8NBF6 648 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 BRSK1Q8TDC3 778 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 EXTL1Q92935 676 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 APMAPQ9HDC9 416 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 OGFRQ9NZT2 677 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 ARL5AQ9Y689 179 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 CCDC66A2RUB6 948 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 STX7O15400 261 aaKnown RBP20.35■□□□□ 0.85
SDCBP-209ENST00000522243 KCNN4O15554 427 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 AMD1P17707 334 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 PSMB4P28070 264 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 CTSCP53634 463 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 RWDD2BP57060 319 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 CLCA4Q14CN2 919 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 LINC00303Q3SY05 128 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ANKRD20A2Q5SQ80 823 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 GPRC6AQ5T6X5 926 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ANKRD20A1Q5TYW2 823 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ANKRD20A3Q5VUR7 823 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ITPRIPL1Q6GPH6 555 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 DARS2Q6PI48 645 aaKnown RBP20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ABRAXAS1Q6UWZ7 409 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 GAS2L3Q86XJ1 694 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 CDKL3Q8IVW4 592 aaPredicted RBP20.35■□□□□ 0.85
SDCBP-209ENST00000522243 IL22RA1Q8N6P7 574 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ZSCAN1Q8NBB4 408 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ALG3Q92685 438 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 ASPSCR1Q9BZE9 553 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 EPB41L1Q9H4G0 881 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 WDR37Q9Y2I8 494 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 MGAQ8IWI9 3026 aa20.35■□□□□ 0.85
SDCBP-209ENST00000522243 GRID2IPA4D2P6 1211 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 OR2AG2A6NM03 316 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 GAPDHSO14556 408 aaPredicted RBP20.34■□□□□ 0.85
SDCBP-209ENST00000522243 RAD1O60671 282 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 POP7O75817 140 aaKnown RBP20.34■□□□□ 0.85
SDCBP-209ENST00000522243 ANXA9O76027 345 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 UBXN7O94888 489 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 PYGMP11217 842 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 VCLP18206 1134 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 PBLDP30039 288 aaPredicted RBP20.34■□□□□ 0.85
SDCBP-209ENST00000522243 VAV2P52735 878 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 RAB15P59190 212 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 MC2RQ01718 297 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 LDLRAP1Q5SW96 308 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 TMEM220Q6QAJ8 160 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 KIAA1328Q86T90 577 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 PLXDC1Q8IUK5 500 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 CACNA2D3Q8IZS8 1091 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 EXD3Q8N9H8 876 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 DDHD1Q8NEL9 900 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 CCDC110Q8TBZ0 833 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 DTX3LQ8TDB6 740 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 CXorf40BQ96DE9 158 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 RTP4Q96DX8 246 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 RNF31Q96EP0 1072 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 MED8Q96G25 268 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 CALR3Q96L12 384 aaKnown RBP20.34■□□□□ 0.85
SDCBP-209ENST00000522243 TGM7Q96PF1 710 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 UCK1Q9HA47 277 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 POT1Q9NUX5 634 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.34■□□□□ 0.852e-9■□□□□ 9.4
SDCBP-209ENST00000522243 EFR3BQ9Y2G0 817 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 KCTD3Q9Y597 815 aa20.34■□□□□ 0.85
SDCBP-209ENST00000522243 ZNF106Q9H2Y7 1883 aaKnown RBP20.34■□□□□ 0.85
SDCBP-209ENST00000522243 MN1Q10571 1320 aaPredicted RBP20.33■□□□□ 0.85
SDCBP-209ENST00000522243 PLA2G2AP14555 144 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 PTPN7P35236 360 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 ITGA9Q13797 1035 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 WASH2PQ6VEQ5 465 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 RANBP10Q6VN20 620 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 AMZ2Q86W34 360 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 OR4K2Q8NGD2 314 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 ZNF398Q8TD17 642 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 NAT14Q8WUY8 206 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 FERMT1Q9BQL6 677 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 ARHGAP9Q9BRR9 750 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 ZCCHC2Q9C0B9 1178 aaKnown RBP20.33■□□□□ 0.85
SDCBP-209ENST00000522243 WASH6PQ9NQA3 447 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 PSMD13Q9UNM6 376 aa20.33■□□□□ 0.85
SDCBP-209ENST00000522243 FASNP49327 2511 aaKnown RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 A0A0U1RQJ8 604 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 CAPN5O15484 640 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 C9P02748 559 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 LIFP15018 202 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 LPOP22079 712 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 AKT1P31749 480 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 ADRA1AP35348 466 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 CETN2P41208 172 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 LEPRP48357 1165 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms