RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SLC12A2P55011 1212 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 POU4F1Q01851 419 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 AGBL2Q5U5Z8 902 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 CRTC3Q6UUV7 619 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 TMEM207Q6UWW9 146 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 ABI3BPQ7Z7G0 1075 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 SIDT2Q8NBJ9 832 aaKnown RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 HEXDCQ8WVB3 486 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 GPR21Q99679 349 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 E5RI56 91 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 SCAMP1O15126 338 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 VEGFDO43915 354 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 CEACAM5P06731 702 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 STMN1P16949 149 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 KRT4P19013 534 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 SERPINB8P50452 374 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 IRF9Q00978 393 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
CLK4-210ENST00000522136 SH2D5Q6ZV89 423 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 ZNF547Q8IVP9 402 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 VPS11Q9H270 941 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 PCMTD2Q9NV79 361 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 FAM8A1Q9UBU6 413 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 MOSPD1Q9UJG1 213 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 A0A096LPK6 155 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 A6NNZ2 444 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 LILRB5O75023 590 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 SPAG7O75391 227 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 WNT1P04628 370 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 C2P06681 752 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 OR56A5P0C7T3 313 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 SLC35E2BP0CK96 405 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 PBLDP30039 288 aaPredicted RBP13.19□□□□□ -0.3
CLK4-210ENST00000522136 NUDT1P36639 197 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 MAGEA12P43365 314 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 CSRP3P50461 194 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 CLCN7P51798 805 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 RAB10P61026 200 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 PAQR3Q6TCH7 311 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 KYAT3Q6YP21 454 aaKnown RBP13.19□□□□□ -0.3
CLK4-210ENST00000522136 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 SPATA6LQ8N4H0 392 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 NELL1Q92832 810 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 ISL2Q96A47 359 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
CLK4-210ENST00000522136 ZCCHC2Q9C0B9 1178 aaKnown RBP13.19□□□□□ -0.3
CLK4-210ENST00000522136 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
CLK4-210ENST00000522136 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
CLK4-210ENST00000522136 NUAK1O60285 661 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 VPS26AO75436 327 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 AP2A2O94973 939 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ITPKAP23677 461 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ATP5DP30049 168 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 CCR7P32248 378 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 DHPSP49366 369 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 PRLHRP49683 370 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 KIAA1024LP59773 190 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 GTF2H3Q13889 308 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 NFATC4Q14934 902 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 PLA2G4EQ3MJ16 856 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 SLC22A18ASQ8N1D0 253 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 C1orf216Q8TAB5 229 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 CD200R1Q8TD46 325 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ANKRD49Q8WVL7 239 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 DNASE2BQ8WZ79 361 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 STMN4Q9H169 189 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 FGF22Q9HCT0 170 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TM7SF3Q9NS93 570 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TSR3Q9UJK0 312 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 COMMD10Q9Y6G5 202 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TDRD6O60522 2096 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 H3BMM5 538 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 CHUKO15111 745 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 HOXC4P09017 264 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 THEGLP0DJG4 465 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 RABIFP47224 123 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 THOP1P52888 689 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 YPEL5P62699 121 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 PLK5Q496M5 336 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 HSP90B2PQ58FF3 399 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 PLD6Q8N2A8 252 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms