RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 FAM170AA1A519 330 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CCDC78A2IDD5 438 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 TRIM49BA6NDI0 452 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 KIR2DS3K7RE56 304 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 PCDH17O14917 1159 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 SNX2O60749 519 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 KLF7O75840 302 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 WISP2O76076 250 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 EBLN1P0CF75 366 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 RORAP35398 523 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 ADH7P40394 386 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 TSFMP43897 325 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CSNK1DP48730 415 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 SOX8P57073 446 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 KIR2DS5Q14953 304 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 C2CD6Q53TS8 623 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CFAP58Q5T655 872 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 DENND2CQ68D51 928 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 GJB7Q6PEY0 223 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 ZNF765Q7L2R6 523 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CHST15Q7LFX5 561 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 MRGPREQ86SM8 312 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 TSPAN33Q86UF1 283 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 GALNT13Q8IUC8 556 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 DSELQ8IZU8 1212 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 NRGNQ92686 78 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 SCAMP4Q969E2 229 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 SGSM3Q96HU1 749 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 TREX2Q9BQ50 279 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 WDR77Q9BQA1 342 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 HERPUD2Q9BSE4 406 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 MLPHQ9BV36 600 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 PLCB1Q9NQ66 1216 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 EPHA6Q9UF33 1036 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CNOT8Q9UFF9 292 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 ZNHIT2Q9UHR6 403 aa8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 CNOT6Q9ULM6 557 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-212ENST00000521944 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 NPIPB15A6NHN6 443 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 WASH4PA8MWX3 477 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CCL21O00585 134 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CPNE3O75131 537 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ATP1A1P05023 1023 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 MYL1P05976 194 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 XRCC1P18887 633 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 NFKB1P19838 968 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SERPINA4P29622 427 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 PRCPP42785 496 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CAPZBP47756 277 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 GABRB2P47870 512 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 IST1P53990 364 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 APBA1Q02410 837 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 FOXD4Q12950 439 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SKOR2Q2VWA4 1001 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 IGFL2Q6UWQ7 119 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CAPN12Q6ZSI9 719 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 Q71RC1 249 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ZNF354CQ86Y25 554 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 PYROXD2Q8N2H3 581 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CCDC185Q8N715 623 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 RTL3Q8N8U3 475 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SHC3Q92529 594 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ZNF514Q96K75 400 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SMIM14Q96QK8 99 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SMR3AQ99954 134 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ENKD1Q9H0I2 346 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ABCG8Q9H221 673 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 ATP13A3Q9H7F0 1226 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 UPF2Q9HAU5 1272 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 UBE2TQ9NPD8 197 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 UBA2Q9UBT2 640 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 CD84Q9UIB8 345 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 HPSEQ9Y251 543 aa8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 INTS1Q8N201 2190 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-212ENST00000521944 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 GNB5O14775 395 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 HTRA2O43464 458 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 PRAMEF11O60813 436 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 SCRG1O75711 98 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 JCHAINP01591 159 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 ALPPP05187 535 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 ACP5P13686 325 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 PFKFB1P16118 471 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 AMD1P17707 334 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 DNAJA1P31689 397 aaKnown RBP8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 VIPR1P32241 457 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 PBX1P40424 430 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 GPR1P46091 355 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 ME1P48163 572 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 FOXL2P58012 376 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 POLR2LP62875 67 aaKnown RBP8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 CSNK1G2P78368 415 aa8.68□□□□□ -1.02
TRAPPC9-212ENST00000521944 ATP11AP98196 1134 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms