RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ORAI1Q96D31 301 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 HDAC11Q96DB2 347 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 SIPA1Q96FS4 1042 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 NUDCD1Q96RS6 583 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 SLA2Q9H6Q3 261 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PCDH9Q9HC56 1237 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 NOX4Q9NPH5 578 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 KRCC1Q9NPI7 259 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 EQTNQ9NQ60 294 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 MCM9Q9NXL9 1143 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 TAS2R14Q9NYV8 317 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 RCC2Q9P258 522 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PTGFRNQ9P2B2 879 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PCDHAC2Q9Y5I4 1007 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 HS3ST3B1Q9Y662 390 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF804BA4D1E1 1349 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 HEG1Q9ULI3 1381 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A0B4J293 547 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 OR6C76A6NM76 312 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 EIF4E1BA6NMX2 242 aaKnown RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TMEM189-UBE2V1I3L0A0 370 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SOCS6O14544 535 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GCNT3O95395 438 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TCF4P15884 667 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 PFKFB1P16118 471 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 ADRA2CP18825 462 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TNNT3P45378 269 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GMPSP49915 693 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 C21orf58P58505 322 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TAS2R38P59533 333 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TUBB4BP68371 445 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 ACSM1Q08AH1 577 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 MAD2L1Q13257 205 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 UBE2V1Q13404 147 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GPR18Q14330 331 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 E2F5Q15329 346 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TYSND1Q2T9J0 566 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 MANEAQ5SRI9 462 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 C11orf87Q6NUJ2 197 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 DGLUCYQ7Z3D6 616 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 CENPVQ7Z7K6 275 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SNX32Q86XE0 403 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRR26Q8N8Z3 221 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 NAT8LQ8N9F0 302 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 CAMKVQ8NCB2 501 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 FIBINQ8TAL6 211 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SLC44A1Q8WWI5 657 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 OIT3Q8WWZ8 545 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 FAM162AQ96A26 154 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPATA17Q96L03 361 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 MUS81Q96NY9 551 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 OR6C1Q96RD1 312 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 FZD8Q9H461 694 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 RAD21L1Q9H4I0 556 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 CATSPERBQ9H7T0 1116 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GRPEL1Q9HAV7 217 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 PIH1D3Q9NQM4 214 aaKnown RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TMEM30AQ9NV96 361 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 KLHL9Q9P2J3 617 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 RHCGQ9UBD6 479 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 DDX25Q9UHL0 483 aaKnown RBP3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 TAF1P21675 1872 aa3.37□□□□□ -1.87
HMGN1P28-201ENST00000521340 CKAP5Q14008 2032 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A0U1RQJ8 604 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 GOLGA6L9A6NEM1 432 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ANKUB1A6NFN9 424 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SRRM3A6NNA2 597 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ENO4A6NNW6 628 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 H0YGN5 161 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ITM2AO43736 263 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 FMO6PO60774 539 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 DIAPH2O60879 1101 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 GOSR1O95249 250 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 TOMM40O96008 361 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SSTR2P30874 369 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 TIA1P31483 386 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 GABRA5P31644 462 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 STX2P32856 288 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 AMTP48728 403 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 NUDT6P53370 316 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 NAGLUP54802 743 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 CDK3Q00526 305 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 KLF9Q13886 244 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 OASLQ15646 514 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ASIC2Q16515 512 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MEP1AQ16819 746 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MEP1BQ16820 701 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 FNBP1LQ5T0N5 605 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 GRTP1Q5TC63 336 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 PLA2G4FQ68DD2 849 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 KCTD18Q6PI47 426 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SHC4Q6S5L8 630 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms