RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SLC9B2Q86UD5 537 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 AMZ2Q86W34 360 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 ACTRT1Q8TDG2 376 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 MAGOHBQ96A72 148 aaKnown RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 NAP1L3Q99457 506 aaPredicted RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 POLR1BQ9H9Y6 1135 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 RDH14Q9HBH5 336 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 EIF2B3Q9NR50 452 aaKnown RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 KCNK4Q9NYG8 393 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 RAXQ9Y2V3 346 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF106Q9H2Y7 1883 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 PKD1L2Q7Z442 2459 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 IGHV1OR21-1A0A087WYE8 117 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 HEATR9A2RTY3 570 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 PMS2P1A4D2B8 440 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 CPNE6O95741 557 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 PRSS56P0CW18 603 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 BRAFP15056 766 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 IDSP22304 550 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 RPL10P27635 214 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 CCKBRP32239 447 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 ARSDP51689 593 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 DRG2P55039 364 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 ZFP36L1Q07352 338 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 CYP1B1Q16678 543 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 SKIDA1Q1XH10 827 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 MAP9Q49MG5 647 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 GPR33Q49SQ1 333 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 ZRANB3Q5FWF4 1079 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 NKAIN2Q5VXU1 208 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 USP53Q70EK8 1073 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 SLITRK4Q8IW52 837 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 BEND7Q8N7W2 519 aaPredicted RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 DCUN1D1Q96GG9 259 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF514Q96K75 400 aaPredicted RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 TMEM74Q96NL1 305 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 RANBP9Q96S59 729 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 SLC38A3Q99624 504 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 COPS8Q99627 209 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 NUDT22Q9BRQ3 303 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 STN1Q9H668 368 aaKnown RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 EPB41L5Q9HCM4 733 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 CPNE7Q9UBL6 633 aa20.3■□□□□ 0.84
TRIM35-203ENST00000521253 DNMT3AQ9Y6K1 912 aaPredicted RBP20.3■□□□□ 0.84
TRIM35-203ENST00000521253 CCDC187A0A096LP49 1063 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 TRBV5-4A0A0C4DH59 114 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 TMX2-CTNND1H3BSU7 103 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF185O15231 689 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 SGTAO43765 313 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 KCNJ13O60928 360 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 ADRA1DP25100 572 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 COILP38432 576 aaPredicted RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 UBE2IP63279 158 aaKnown RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 DMPKQ09013 629 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 AGAP9Q5VTM2 703 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 ABRAXAS1Q6UWZ7 409 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 WASH2PQ6VEQ5 465 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 FAM83HQ6ZRV2 1179 aaPredicted RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 PIM3Q86V86 326 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 SERPINA9Q86WD7 417 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 PIANPQ8IYJ0 282 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 OR13J1Q8NGT2 312 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 WDR36Q8NI36 951 aaKnown RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 LIN37Q96GY3 246 aaPredicted RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 STRADBQ9C0K7 418 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 SEMA6CQ9H3T2 930 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 WASH6PQ9NQA3 447 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF624Q9P2J8 865 aaPredicted RBP20.29■□□□□ 0.84
TRIM35-203ENST00000521253 UNC13CQ8NB66 2214 aa20.29■□□□□ 0.84
TRIM35-203ENST00000521253 CFAP99D6REC4 459 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 CES2O00748 559 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 DXOO77932 396 aaKnown RBP20.28■□□□□ 0.84
TRIM35-203ENST00000521253 RALBP11234 206 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 ACRV1P26436 265 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 PBLDP30039 288 aaPredicted RBP20.28■□□□□ 0.84
TRIM35-203ENST00000521253 CSF2RBP32927 897 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 SLC19A1P41440 591 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 VPS41P49754 854 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 GNG11P61952 73 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 GPLD1P80108 840 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 CFHR1Q03591 330 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 CACNG1Q06432 222 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 LAMB3Q13751 1172 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 NFE2L1Q14494 772 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 CLPPQ16740 277 aaPredicted RBP20.28■□□□□ 0.84
TRIM35-203ENST00000521253 BCL7AQ4VC05 210 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 TSTD2Q5T7W7 516 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 FOXR1Q6PIV2 292 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF574Q6ZN55 896 aaPredicted RBP20.28■□□□□ 0.84
TRIM35-203ENST00000521253 TAS2R42Q7RTR8 314 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 LSMEM2Q8N112 164 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 AVL9Q8NBF6 648 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 SH3KBP1Q96B97 665 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 PRR11Q96HE9 360 aaPredicted RBP20.28■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF778Q96MU6 729 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 ZDHHC3Q9NYG2 299 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 SLC2A6Q9UGQ3 507 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 WDR37Q9Y2I8 494 aa20.28■□□□□ 0.84
TRIM35-203ENST00000521253 TCAF1Q9Y4C2 921 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms