RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SLC19A1P41440 591 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 GSDMDP57764 484 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 VAC14Q08AM6 782 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 OLIG2Q13516 323 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 GTF2H3Q13889 308 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 ARHGAP40Q5TG30 622 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 TMEM164Q5U3C3 297 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 AGAP9Q5VTM2 703 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 DENND5AQ6IQ26 1287 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 RASGEF1AQ8N9B8 481 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 LSM14AQ8ND56 463 aaKnown RBP16.78■□□□□ 0.28
SQLE-205ENST00000521232 AGBL5Q8NDL9 886 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 SLC35B2Q8TB61 432 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 C19orf43Q9BQ61 176 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 APOL2Q9BQE5 337 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 ZCCHC2Q9C0B9 1178 aaKnown RBP16.78■□□□□ 0.28
SQLE-205ENST00000521232 FOXJ2Q9P0K8 574 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 ZNF624Q9P2J8 865 aaPredicted RBP16.78■□□□□ 0.28
SQLE-205ENST00000521232 DNAJC16Q9Y2G8 782 aa16.78■□□□□ 0.28
SQLE-205ENST00000521232 DNMT3AQ9Y6K1 912 aaPredicted RBP16.78■□□□□ 0.28
SQLE-205ENST00000521232 ZNF106Q9H2Y7 1883 aaKnown RBP16.78■□□□□ 0.28
SQLE-205ENST00000521232 LILRA5A6NI73 299 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 K7ENP7 123 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 GPR39O43194 453 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 CRTAMO95727 393 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 VIPP01282 170 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 LIPCP11150 499 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 VCLP18206 1134 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 CD82P27701 267 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 CSTF2P33240 577 aaKnown RBP eCLIP16.77■□□□□ 0.28
SQLE-205ENST00000521232 PDE1BQ01064 536 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 DMPKQ09013 629 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TGIF1Q15583 401 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 GPRC6AQ5T6X5 926 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 KCTD11Q693B1 232 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 INO80CQ6PI98 192 aaPredicted RBP16.77■□□□□ 0.28
SQLE-205ENST00000521232 ARHGAP22Q7Z5H3 698 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 DTX1Q86Y01 620 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TRAPPC5Q8IUR0 188 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 OR4K2Q8NGD2 314 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 NCSTNQ92542 709 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TAAR9Q96RI9 348 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 CCNL2Q96S94 520 aaPredicted RBP16.77■□□□□ 0.28
SQLE-205ENST00000521232 TBL1YQ9BQ87 522 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TBC1D10AQ9BXI6 508 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TSGA10Q9BZW7 698 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 FEZ2Q9UHY8 353 aaPredicted RBP16.77■□□□□ 0.28
SQLE-205ENST00000521232 R3HDM2Q9Y2K5 976 aaKnown RBP16.77■□□□□ 0.28
SQLE-205ENST00000521232 KCTD3Q9Y597 815 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 PCDHGA3Q9Y5H0 932 aa16.77■□□□□ 0.28
SQLE-205ENST00000521232 TCRBV7S2A1N4TA0A589 114 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 AGAP14A8MT82 685 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 PDZK1P1A8MUH7 402 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.76■□□□□ 0.27
SQLE-205ENST00000521232 TK2O00142 265 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 ATXN7O15265 892 aaPredicted RBP16.76■□□□□ 0.27
SQLE-205ENST00000521232 EFSO43281 561 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 POP7O75817 140 aaKnown RBP16.76■□□□□ 0.27
SQLE-205ENST00000521232 PRAMEF1O95521 474 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 RPL10P27635 214 aaKnown RBP16.76■□□□□ 0.27
SQLE-205ENST00000521232 CTSCP53634 463 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 XIAPP98170 497 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 TMEM220Q6QAJ8 160 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 TMEM26Q6ZUK4 368 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 AMZ2Q86W34 360 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 LRRC45Q96CN5 670 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 OCIAD1Q9NX40 245 aa16.76■□□□□ 0.27
SQLE-205ENST00000521232 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 B4E171 279 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 KRT86O43790 486 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 SRP72O76094 671 aaKnown RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 METTL18O95568 372 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 TSPAN7P41732 249 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 PPM1FP49593 454 aaPredicted RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 ARSDP51689 593 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 DRG2P55039 364 aaKnown RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 RHDQ02161 417 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 SPARCL1Q14515 664 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 CLCA4Q14CN2 919 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 ARHGEF18Q6ZSZ5 1173 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 ZFAND4Q86XD8 727 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 TRIM48Q8IWZ4 208 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 RBM12BQ8IXT5 1001 aaKnown RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 BMPERQ8N8U9 685 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 CCDC112Q8NEF3 446 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 ZNF514Q96K75 400 aaPredicted RBP16.75■□□□□ 0.27
SQLE-205ENST00000521232 TMEM121Q9BTD3 319 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 DDA1Q9BW61 102 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 ASB8Q9H765 288 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 SLC40A1Q9NP59 571 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 POT1Q9NUX5 634 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 OGFRQ9NZT2 677 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 FKBPLQ9UIM3 349 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
SQLE-205ENST00000521232 WDR37Q9Y2I8 494 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms