RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ATG10Q9H0Y0 220 aa11.23□□□□□ -0.61
CLK4-206ENST00000520878 IGFLR1Q9H665 355 aa11.23□□□□□ -0.61
CLK4-206ENST00000520878 IL26Q9NPH9 171 aa11.23□□□□□ -0.61
CLK4-206ENST00000520878 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
CLK4-206ENST00000520878 CFAP99D6REC4 459 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 FFAR2O15552 330 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TRBC1P01850 177 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 TYRP14679 529 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 SLC26A3P40879 764 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 HALP42357 657 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ABRQ12979 859 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ACOX1Q15067 660 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 SAMD4BQ5PRF9 694 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 GRAMD4Q6IC98 578 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 CERS6Q6ZMG9 384 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 SYVN1Q86TM6 617 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ADGRG2Q8IZP9 1017 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 CHST14Q8NCH0 376 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PPM1MQ96MI6 270 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 CACNA2D2Q9NY47 1150 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 IKZF3Q9UKT9 509 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 AP4S1Q9Y587 144 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 GRM6O15303 877 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TIMP1P01033 207 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PSMC3P17980 439 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 VCLP18206 1134 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 NELFEP18615 380 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 CR2P20023 1033 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 IL10P22301 178 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ITPKAP23677 461 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 MAP4P27816 1152 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 MAPK8P45983 427 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 HMGCS1Q01581 520 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 NFATC2Q13469 925 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 MYLK3Q32MK0 819 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 SNX20Q7Z614 316 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 RALGPS2Q86X27 583 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 KBTBD2Q8IY47 623 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ZBTB2Q8N680 514 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ELMO1Q92556 727 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PEX13Q92968 403 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ATOH8Q96SQ7 321 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 HERC2P3Q9BVR0 1158 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TDP1Q9NUW8 608 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 POLG2Q9UHN1 485 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 A0A1W2PQ67 120 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ENO4A6NNW6 628 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TIPRLO75663 272 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 OR56A5P0C7T3 313 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PABPC1P11940 636 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 BPIP17213 487 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 GTF2H2Q13888 395 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 SFT2D3Q587I9 215 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 ZNF648Q5T619 568 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 GTF2H2CQ6P1K8 395 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 EFL1Q7Z2Z2 1120 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 SPPL2CQ8IUH8 684 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 CD200R1Q8TD46 325 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 BADQ92934 168 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 TRIM43Q96BQ3 446 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 MED8Q96G25 268 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 BRD9Q9H8M2 597 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 CXXC1Q9P0U4 656 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 PSMD13Q9UNM6 376 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 POLR3HQ9Y535 204 aaPredicted RBP11.22□□□□□ -0.61
CLK4-206ENST00000520878 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 PCDHB1Q9Y5F3 818 aa11.22□□□□□ -0.61
CLK4-206ENST00000520878 FAM149AA5PLN7 773 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 DPPA5A6NC42 116 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 NPIPB15A6NHN6 443 aaPredicted RBP11.21□□□□□ -0.61
CLK4-206ENST00000520878 CTSAP10619 480 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 MTHFD2P13995 350 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 PTPN2P17706 415 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 MSH3P20585 1137 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 PAX7P23759 505 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 HLA-FP30511 346 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 UFM1P61960 85 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 TBCELQ5QJ74 424 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 THEMIS2Q5TEJ8 643 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 ST13P4Q8IZP2 240 aaPredicted RBP11.21□□□□□ -0.61
CLK4-206ENST00000520878 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
CLK4-206ENST00000520878 KCNJ9Q92806 393 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
CLK4-206ENST00000520878 TBCDQ9BTW9 1192 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 MEAF6Q9HAF1 191 aa11.21□□□□□ -0.61
CLK4-206ENST00000520878 MRGBPQ9NV56 204 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms