RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 PPP1R35Q8TAP8 253 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 PARD3BQ8TEW8 1205 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 DNASE2BQ8WZ79 361 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 SIPA1Q96FS4 1042 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 P2RY11Q96G91 374 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 MESP1Q9BRJ9 268 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CSNK1G1Q9HCP0 422 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 TM7SF3Q9NS93 570 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 THAP10Q9P2Z0 257 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 RASAL2Q9UJF2 1139 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 MTMR6Q9Y217 621 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 ITPR1Q14643 2758 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 KNL1Q8NG31 2342 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 URB1O60287 2271 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 A0A1B0GVT2 93 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 A1L4Q6 167 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CGB1A6NKQ9 187 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 HHLA1C9JL84 531 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 BCAT2O15382 392 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 POLR2DO15514 142 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SYNCRIPO60506 623 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CBFA2T3O75081 653 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CER1O95813 267 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 KLKB1P03952 638 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 FESP07332 822 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 RALAP11233 206 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 HLA-EP13747 358 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CD58P19256 250 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 OXTRP30559 389 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 MATKP42679 507 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ABCG1P45844 678 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CSNK1EP49674 416 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 TPMTP51580 245 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 MFAP3P55082 362 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CUL4BQ13620 913 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 KNOP1Q1ED39 458 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 HLA-BQ31612 363 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SHC4Q6S5L8 630 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 PARS2Q7L3T8 475 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SCD5Q86SK9 330 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 UNC93AQ86WB7 457 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 GAS2L3Q86XJ1 694 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 C12orf56Q8IXR9 622 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SLC15A4Q8N697 577 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ZBTB34Q8NCN2 500 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CADM4Q8NFZ8 388 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 UCMAQ8WVF2 138 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SORCS1Q8WY21 1168 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 PRCCQ92733 491 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 DPF1Q92782 380 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 TWNKQ96RR1 684 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 HNRNPABQ99729 332 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SEMA4CQ9C0C4 833 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CIPCQ9C0C6 399 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CUEDC2Q9H467 287 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ZSCAN16Q9H4T2 348 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ANLNQ9NQW6 1124 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 DUSP22Q9NRW4 184 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ELOVL2Q9NXB9 296 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SH3BP4Q9P0V3 963 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 CLEC4EQ9ULY5 219 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 SCML2Q9UQR0 700 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 MORC2Q9Y6X9 1032 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 PCDH15Q96QU1 1955 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 TNRC6BQ9UPQ9 1833 aaKnown RBP6.03□□□□□ -1.44
PABPC1-216ENST00000520868 APC2O95996 2303 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 ACACAQ13085 2346 aa6.03□□□□□ -1.44
PABPC1-216ENST00000520868 UBE4BO95155 1302 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 PVALEFA0A1B0GWK0 134 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 FAM149AA5PLN7 773 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TRABD2BA6NFA1 517 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 EIF4E1BA6NMX2 242 aaKnown RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 BTN3A1O00481 513 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 NPC1O15118 1278 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 STX6O43752 255 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TSPAN3O60637 253 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 PPP6R2O75170 966 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TUSC2O75896 110 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 PENKP01210 267 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 HLA-DRAP01903 254 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 RPN1P04843 607 aaKnown RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 CELA2AP08217 269 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 DLDP09622 509 aaKnown RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 NPSP0C0P6 89 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 CORO1AP31146 461 aaKnown RBP6.02□□□□□ -1.45
PABPC1-216ENST00000520868 CHKAP35790 457 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 PIK3CAP42336 1068 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 COPAP53621 1224 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TPTEP56180 551 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 COG7P83436 770 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 STK4Q13043 487 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 RAB32Q13637 225 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 ZNF234Q14588 700 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 KIF19Q2TAC6 998 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 TBC1D25Q3MII6 688 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 ZACNQ401N2 412 aa6.02□□□□□ -1.45
PABPC1-216ENST00000520868 PCID2Q5JVF3 399 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms