RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 FER1L6-AS2Q96M78 137 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 COQ10AQ96MF6 247 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 LRFN5Q96NI6 719 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 TBCBQ99426 244 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 TRIM8Q9BZR9 551 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RAB33BQ9H082 229 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 SUDS3Q9H7L9 328 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 YY1AP1Q9H869 796 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RMI1Q9H9A7 625 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RMND1Q9NWS8 449 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 VPS18Q9P253 973 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 UBA2Q9UBT2 640 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 DNAI1Q9UI46 699 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 PCDHA7Q9UN72 937 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 SNX7Q9UNH6 387 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 MAPK8IP1Q9UQF2 711 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 OSGIN2Q9Y236 505 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ST14Q9Y5Y6 855 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ACTL7AQ9Y615 435 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 NCOA6Q14686 2063 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CACNA1CQ13936 2221 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 A0A1W2PQJ5 194 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 INSIG1O15503 277 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 KCNN4O15554 427 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 PAX4O43316 350 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 NADKO95544 446 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CALCAP01258 141 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 FUCA1P04066 466 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 ERBB2P04626 1255 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CD63P08962 238 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 AMD1P17707 334 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 GM2AP17900 193 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 XRCC1P18887 633 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 NFKB1P19838 968 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 AGAP20933 346 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 VAMP1P23763 118 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CMA1P23946 247 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 KRT9P35527 623 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 HADHAP40939 763 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 TSFMP43897 325 aaKnown RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 GABRB2P47870 512 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 ARCN1P48444 511 aaKnown RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 GFERP55789 205 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 AP1S1P61966 158 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 RPS18P62269 152 aaKnown RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 NSUN2Q08J23 767 aaKnown RBP eCLIP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 TUBB3Q13509 450 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 RFTN1Q14699 578 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 MYBPC3Q14896 1274 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 FAM102AQ5T9C2 384 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CACHD1Q5VU97 1274 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 XKRXQ6PP77 449 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 ADAMTSL4Q6UY14 1074 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 FAM131BQ86XD5 332 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CAMK1DQ8IU85 385 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 RTL3Q8N8U3 475 aaKnown RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 SIDT2Q8NBJ9 832 aaKnown RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CHDHQ8NE62 594 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 PPP4R1Q8TF05 950 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CHTF18Q8WVB6 975 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 ITLN2Q8WWU7 325 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 KLHL6Q8WZ60 621 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 KAT5Q92993 513 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 EXOC2Q96KP1 924 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 KREMEN1Q96MU8 473 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 TGM7Q96PF1 710 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 C17orf62Q9BQA9 187 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 DPH2Q9BQC3 489 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-207ENST00000520168 DHRS4Q9BTZ2 278 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 NLNQ9BYT8 704 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 TSPY26PQ9H489 355 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CATSPERBQ9H7T0 1116 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CPNE7Q9UBL6 633 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 LHX3Q9UBR4 397 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 EPHA6Q9UF33 1036 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 TCFL5Q9UL49 500 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 PADI2Q9Y2J8 665 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 PLEKHM1Q9Y4G2 1056 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 SNX10Q9Y5X0 201 aa4.81□□□□□ -1.64
SDCBP-207ENST00000520168 CCDC88CQ9P219 2028 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 DOCK10Q96BY6 2186 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 A6NL46 340 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 WASH4PA8MWX3 477 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GPR89AB7ZAQ6 455 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 E2F3O00716 465 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TRAFD1O14545 582 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 FANCGO15287 622 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 FGF10O15520 208 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GRID2O43424 1007 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PRICKLE3O43900 615 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SOCS5O75159 536 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GADD45BO75293 160 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SCRG1O75711 98 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 LRIG2O94898 1065 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 HEXIM1O94992 359 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms