RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 WDR37Q9Y2I8 494 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF891A8MT65 544 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 PDZK1P1A8MUH7 402 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 F5H423 210 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 GAPDHSO14556 408 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 TOX3O15405 576 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 SUV39H1O43463 412 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 POP7O75817 140 aaKnown RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 STK17BO94768 372 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 DLGAP3O95886 979 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 AMD1P17707 334 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 LEPRP48357 1165 aaKnown RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 ABHD18Q0P651 414 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 ZDHHC20Q5W0Z9 365 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 BORAQ6PGQ7 559 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 PRICKLE2Q7Z3G6 844 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 TRIM48Q8IWZ4 208 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 RASGEF1AQ8N9B8 481 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 KRT35Q92764 455 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 SLC25A18Q9H1K4 315 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 ADNPQ9H2P0 1102 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 POT1Q9NUX5 634 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 HACD3Q9P035 362 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 KLHL8Q9P2G9 620 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-205ENST00000519623 TRIM10Q9UDY6 481 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 IL17BQ9UHF5 180 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 TRHDEQ9UKU6 1024 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 PCDHA13Q9Y5I0 950 aa12.22□□□□□ -0.45
CSMD1-205ENST00000519623 BSNQ9UPA5 3926 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 HACD1B0YJ81 288 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 GPR39O43194 453 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 BUD23O43709 281 aaKnown RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 KIF1CO43896 1103 aaKnown RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 KCNJ13O60928 360 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 WISP1O95388 367 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 AGTP01019 485 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 HLA-DPA1P20036 260 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 SPAM1P38567 509 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 CTSCP53634 463 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 SH3BP2P78314 561 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 KCNC4Q03721 635 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 DMPKQ09013 629 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 MPP3Q13368 585 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 XRCC4Q13426 336 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 GPR18Q14330 331 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 PTPRCAPQ14761 206 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 SARM1Q6SZW1 724 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 FAM151BQ6UXP7 276 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 BBS12Q6ZW61 710 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 TRAPPC5Q8IUR0 188 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 GDAP1Q8TB36 358 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 BLOC1S5Q8TDH9 187 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 KLHL6Q8WZ60 621 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 RSC1A1Q92681 617 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 HAUS1Q96CS2 278 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 CATSPER2Q96P56 530 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 TGM7Q96PF1 710 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 GORASP1Q9BQQ3 440 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 RAB33BQ9H082 229 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 TRIT1Q9H3H1 467 aaKnown RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF768Q9H5H4 540 aaKnown RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 GPN2Q9H9Y4 310 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.45
CSMD1-205ENST00000519623 HEMK1Q9Y5R4 338 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 DNMT3AQ9Y6K1 912 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.46
CSMD1-205ENST00000519623 GLYATL1P3A0A0U1RQE8 302 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 TERTO14746 1132 aaKnown RBP12.2□□□□□ -0.46
CSMD1-205ENST00000519623 PPFIA2O75334 1257 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 ZNF28P17035 718 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 VCLP18206 1134 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 F8A1P23610 371 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 RBL1P28749 1068 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 STAT5AP42229 794 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 SEPHS1P49903 392 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 FOXM1Q08050 763 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 GTF2H3Q13889 308 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 MAP7Q14244 749 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 LDLRAP1Q5SW96 308 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 C11orf63Q6NUN7 778 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 TMEM220Q6QAJ8 160 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 RANBP10Q6VN20 620 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 ATG14Q6ZNE5 492 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 FAM83HQ6ZRV2 1179 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-205ENST00000519623 GLT6D1Q7Z4J2 308 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 PRSS42Q7Z5A4 293 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms