RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ZNF574Q6ZN55 896 aaPredicted RBP7.39□□□□□ -1.23
PVT1-206ENST00000517838 BEND5Q7L4P6 421 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 CLEC14AQ86T13 490 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 CHSY1Q86X52 802 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 NPWQ8N729 165 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 OR52K1Q8NGK4 314 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 TCP10LQ8TDR4 215 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 EXTL1Q92935 676 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ARRDC3Q96B67 414 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
PVT1-206ENST00000517838 FCRL2Q96LA5 508 aaPredicted RBP7.39□□□□□ -1.23
PVT1-206ENST00000517838 PPP1R2P1Q96PQ5 205 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 HAPLN3Q96S86 360 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 VAT1Q99536 393 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 DHRS4Q9BTZ2 278 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 SP110Q9HB58 689 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ANLNQ9NQW6 1124 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ARHGEF38Q9NXL2 777 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 KLHL14Q9P2G3 628 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ANKMY1Q9P2S6 941 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
PVT1-206ENST00000517838 VANGL2Q9ULK5 521 aa7.39□□□□□ -1.23
PVT1-206ENST00000517838 ARID1BQ8NFD5 2236 aaPredicted RBP7.39□□□□□ -1.23
PVT1-206ENST00000517838 PLXNA2O75051 1894 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 USP9XQ93008 2570 aaPredicted RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 A0A1W2PQU0 124 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 CPED1A4D0V7 1026 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 EME2A4GXA9 379 aaPredicted RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 NEMP2A6NFY4 417 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FAM159BA6NKW6 160 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ERI2A8K979 691 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 TMEM229AB2RXF0 380 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 AP3B1O00203 1094 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ATP9BO43861 1147 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SNX3O60493 162 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ANXA9O76027 345 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ASMTLO95671 621 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ALPPL2P10696 532 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 TAC1P20366 129 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ADRA1DP25100 572 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ALDH3A1P30838 453 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FOXN2P32314 431 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 GRIA1P42261 906 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 PDX1P52945 283 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SLC18A1P54219 525 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 GEMP55040 296 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 PDE1BQ01064 536 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ITKQ08881 620 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 POU4F2Q12837 409 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ZBTB17Q13105 803 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ZNF177Q13360 481 aaPredicted RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 MPP2Q14168 576 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FZD2Q14332 565 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 CRYMQ14894 314 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 PIP5KL1Q5T9C9 394 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 MROH9Q5TGP6 573 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FAM46CQ5VWP2 391 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 STEAP4Q687X5 459 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 TRMT10BQ6PF06 316 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 CRTC1Q6UUV9 634 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 XKR5Q6UX68 686 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 GCNT7Q6ZNI0 430 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 Q6ZSR6 202 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 USP53Q70EK8 1073 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ZNF534Q76KX8 674 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 MARK2Q7KZI7 788 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 TRPM8Q7Z2W7 1104 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 TFAP2DQ7Z6R9 452 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 YTHDF3Q7Z739 585 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 ABI3BPQ7Z7G0 1075 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 LINC00523Q86TU6 105 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 CCDC117Q8IWD4 279 aaPredicted RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 TP53INP2Q8IXH6 220 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 ARL14Q8N4G2 192 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 LZTR1Q8N653 840 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
PVT1-206ENST00000517838 PPHLN1Q8NEY8 458 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 IPMKQ8NFU5 416 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 OR8D1Q8WZ84 308 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 IFT43Q96FT9 208 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SLC39A13Q96H72 371 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SIGLEC10Q96LC7 697 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 BMFQ96LC9 184 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 TSNARE1Q96NA8 513 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FAM111AQ96PZ2 611 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 DDX50Q9BQ39 737 aaKnown RBP7.38□□□□□ -1.23
PVT1-206ENST00000517838 APOL2Q9BQE5 337 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FICDQ9BVA6 458 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 DUSP23Q9BVJ7 150 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 FSD1LQ9BXM9 530 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 SLC13A1Q9BZW2 595 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 PREBQ9HCU5 417 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 GPR27Q9NS67 375 aa7.38□□□□□ -1.23
PVT1-206ENST00000517838 DNAJC28Q9NX36 388 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms