RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PARD3BQ8TEW8 1205 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 NOC3LQ8WTT2 800 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 MR1Q95460 341 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 JAKMIP2Q96AA8 810 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 MRGPRX3Q96LB0 322 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM81BQ96LP2 452 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 JMJD8Q96S16 334 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 KLF6Q99612 283 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TSG101Q99816 390 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 CBWD1Q9BRT8 395 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC17A9Q9BYT1 436 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 DNAI2Q9GZS0 605 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 DPEP2Q9H4A9 486 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 METTL17Q9H7H0 456 aaPredicted RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 YY1AP1Q9H869 796 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 POPDC2Q9HBU9 364 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ATP13A1Q9HD20 1204 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 ATP13A2Q9NQ11 1180 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 INTS13Q9NVM9 706 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 TRMT1Q9NXH9 659 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 GDAP2Q9NXN4 497 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 DPP3Q9NY33 737 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 IMPACTQ9P2X3 320 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 KLHL3Q9UH77 587 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 DNAI1Q9UI46 699 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 RWDD2AQ9UIY3 292 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 MAN1B1Q9UKM7 699 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SARDHQ9UL12 918 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 EIF3LQ9Y262 564 aaKnown RBP3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 SCN1AP35498 2009 aa3.1□□□□□ -1.91
SCARNA13-201ENST00000516672 EDDM13A0A1B0GTR0 161 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM234BA2RU67 622 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 GTPBP10A4D1E9 387 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TTC34A8MYJ7 566 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PEX12O00623 359 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 MAP2K7O14733 419 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FPGTO14772 594 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 DHHO43323 396 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 MTA2O94776 668 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 MLYCDO95822 493 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TBX18O95935 607 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CPP00450 1065 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 IGHEP01854 428 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 INAFM2P0DMQ5 153 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 EPB41P11171 864 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PABPC1P11940 636 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FGF5P12034 268 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 KRT13P13646 458 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 P4HA1P13674 534 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CD46P15529 392 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TNNI1P19237 187 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 POLR2EP19388 210 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 BMP5P22003 454 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NR2F2P24468 414 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CASP1P29466 404 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PTGS2P35354 604 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CHKAP35790 457 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 LHX1P48742 406 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 GZMKP49863 264 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ST8SIA6P61647 398 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ETF1P62495 437 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SH3BP2P78314 561 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PDE1BQ01064 536 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PAK1Q13153 545 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TBX2Q13207 712 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 KLF1Q13351 362 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NNTQ13423 1086 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ELAVL3Q14576 367 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 IL11RAQ14626 422 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 MAPRE1Q15691 268 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 DPCR1Q3MIW9 517 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SV2CQ496J9 727 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF672Q499Z4 452 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 INTS6LQ5JSJ4 861 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ATXN7L2Q5T6C5 722 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ABHD17BQ5VST6 288 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 C9orf57Q5W0N0 161 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SPECC1LQ69YQ0 1117 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 KRT39Q6A163 491 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ANKRD40Q6AI12 368 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 JADE1Q6IE81 842 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TTI2Q6NXR4 508 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 BRICD5Q6PL45 260 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 VSTM1Q6UX27 236 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 MACC1Q6ZN28 852 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TRAPPC11Q7Z392 1133 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SRLQ86TD4 932 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 JAZF1Q86VZ6 243 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 AMIGO1Q86WK6 493 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CBWD2Q8IUF1 395 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NELFCDQ8IXH7 590 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 DRC7Q8IY82 874 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM186BQ8IYM0 893 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SMYD4Q8IYR2 804 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 GHDCQ8N2G8 530 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TXLNBQ8N3L3 684 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CSGALNACT2Q8N6G5 542 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 C1orf127Q8N9H9 656 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM57AQ8TBR7 257 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ENOX1Q8TC92 643 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms