RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CTNNA2P26232 953 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 RBL1P28749 1068 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A3P35503 534 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 CETN2P41208 172 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 NAP1L1P55209 391 aaKnown RBP17.2■□□□□ 0.34
DDX41-217ENST00000515562 MC2RQ01718 297 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 ABRAXAS1Q6UWZ7 409 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 FAM151BQ6UXP7 276 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 CEACAM20Q6UY09 585 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 DDHD1Q8NEL9 900 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 ACTL9Q8TC94 416 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 JPH3Q8WXH2 748 aaPredicted RBP17.2■□□□□ 0.34
DDX41-217ENST00000515562 ARHGAP9Q9BRR9 750 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 FBXO8Q9NRD0 319 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 SMOXQ9NWM0 555 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 SCHIP1Q9P0W5 487 aaPredicted RBP17.2■□□□□ 0.34
DDX41-217ENST00000515562 ZNF624Q9P2J8 865 aaPredicted RBP17.2■□□□□ 0.34
DDX41-217ENST00000515562 KLHL3Q9UH77 587 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 COL6A6A6NMZ7 2263 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 ZNF106Q9H2Y7 1883 aaKnown RBP17.2■□□□□ 0.34
DDX41-217ENST00000515562 CFAP46Q8IYW2 2715 aa17.2■□□□□ 0.34
DDX41-217ENST00000515562 UBXN7O94888 489 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 C9P02748 559 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 RPL10P27635 214 aaKnown RBP17.19■□□□□ 0.34
DDX41-217ENST00000515562 SLC19A1P41440 591 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 HALP42357 657 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 RWDD2BP57060 319 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 OTUD4Q01804 1114 aaKnown RBP17.19■□□□□ 0.34
DDX41-217ENST00000515562 CHRNA6Q15825 494 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 C11orf96Q7Z7L8 435 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 CACNA2D3Q8IZS8 1091 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 CXorf40BQ96DE9 158 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 RTP4Q96DX8 246 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 PPP1R2P1Q96PQ5 205 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 OSBPL8Q9BZF1 889 aa17.19■□□□□ 0.34
DDX41-217ENST00000515562 AAR2Q9Y312 384 aaKnown RBP17.19■□□□□ 0.34
DDX41-217ENST00000515562 RCCD1A6NED2 376 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 STX7O15400 261 aaKnown RBP17.18■□□□□ 0.34
DDX41-217ENST00000515562 TOX3O15405 576 aaPredicted RBP17.18■□□□□ 0.34
DDX41-217ENST00000515562 RAD1O60671 282 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 BRAFP15056 766 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 AMD1P17707 334 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 WT1P19544 449 aaPredicted RBP17.18■□□□□ 0.34
DDX41-217ENST00000515562 CAPZBP47756 277 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 DRG2P55039 364 aaKnown RBP17.18■□□□□ 0.34
DDX41-217ENST00000515562 DMPKQ09013 629 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 PRPSAP1Q14558 356 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 EXTL1Q92935 676 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 C9orf72Q96LT7 481 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 FICDQ9BVA6 458 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 SLC40A1Q9NP59 571 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 OGFRQ9NZT2 677 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 PILRAQ9UKJ1 303 aa17.18■□□□□ 0.34
DDX41-217ENST00000515562 OR52A4PA6NMU1 304 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 C2orf81A6NN90 581 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 B8ZZF3 427 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 CAPN5O15484 640 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 GPR39O43194 453 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 TJP3O95049 919 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 PRAMEF1O95521 474 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 RBP3P10745 1247 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 TYRP1P17643 537 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 AKT1P31749 480 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 VAV2P52735 878 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 GFERP55789 205 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 EIF3EP60228 445 aaKnown RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 GPR18Q14330 331 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 LONRF2Q1L5Z9 754 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 LINC00303Q3SY05 128 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 NLGN4XQ8N0W4 816 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 RASGEF1AQ8N9B8 481 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 NLGN4YQ8NFZ3 816 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 KIAA1143Q96AT1 154 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 LRRC45Q96CN5 670 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 ZNF514Q96K75 400 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 CTRCQ99895 268 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 GORASP1Q9BQQ3 440 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 ZNF768Q9H5H4 540 aaKnown RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 C10orf88Q9H8K7 445 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 SIDT1Q9NXL6 827 aaKnown RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 REXO2Q9Y3B8 237 aaKnown RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
DDX41-217ENST00000515562 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 ZNF462Q96JM2 2506 aa17.17■□□□□ 0.34
DDX41-217ENST00000515562 C5orf60A6NFR6 353 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 GAPDHSO14556 408 aaPredicted RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 POLR1CO15160 346 aaPredicted RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 KCNN4O15554 427 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 BUD23O43709 281 aaKnown RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A9O60656 530 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 AGTP01019 485 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 SFTPCP11686 197 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 LIFP15018 202 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A6P19224 532 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 LPOP22079 712 aaPredicted RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A1P22309 533 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A4P22310 534 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms