RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CES2O00748 559 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 PLD2O14939 933 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 HGSO14964 777 aaPredicted RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CASC3O15234 703 aaKnown RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 GPR39O43194 453 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 DUX1O43812 170 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 KIF5CO60282 957 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 MPOP05164 745 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 APRTP07741 180 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CD1CP29017 333 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 AKT1P31749 480 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 RPL22P35268 128 aaKnown RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 LMAN1P49257 510 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CTSCP53634 463 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 OR1D5P58170 312 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 UBE2IP63279 158 aaKnown RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CDK16Q00536 496 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 POU6F1Q14863 301 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 C3orf38Q5JPI3 329 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 TMEM220Q6QAJ8 160 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 NLRP9Q7RTR0 991 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 B3GNT8Q7Z7M8 397 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 AMZ2Q86W34 360 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 PRELID2Q8N945 189 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 OR4D9Q8NGE8 314 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 OR52K1Q8NGK4 314 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 OR10G6Q8NH81 332 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 DNAJC1Q96KC8 554 aaKnown RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
CLCN3-210ENST00000515420 SLC46A1Q96NT5 459 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 SLC38A3Q99624 504 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CASS4Q9NQ75 786 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 PRDM8Q9NQV8 689 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 POT1Q9NUX5 634 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 CPNE7Q9UBL6 633 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
CLCN3-210ENST00000515420 A0A1W2PNU3 283 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PDZK1P1A8MUH7 402 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 SNX2O60749 519 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 ETS1P14921 441 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 TPH1P17752 444 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 ACRV1P26436 265 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 RBMS1P29558 406 aaKnown RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 MC4RP32245 332 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CA5AP35218 305 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 EIF2S3P41091 472 aaKnown RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 HALP42357 657 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PRLHRP49683 370 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PCBP4P57723 403 aaKnown RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CACNG1Q06432 222 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 SEPT6Q14141 434 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PLA2G4EQ3MJ16 856 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 AMZ1Q400G9 498 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 WDR74Q6RFH5 385 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 RAB11FIP2Q7L804 512 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 GSTA5Q7RTV2 222 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 TMPRSS9Q7Z410 1059 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CLEC14AQ86T13 490 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 SLC35F6Q8N357 371 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 TAB3Q8N5C8 712 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 GLIS1Q8NBF1 620 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 DCUN1D1Q96GG9 259 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CDKN2AIPNLQ96HQ2 116 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 COPS8Q99627 209 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 CMKLR1Q99788 373 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 FOXP3Q9BZS1 431 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 B3GNT4Q9C0J1 378 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 AKAP7Q9P0M2 348 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PDP2Q9P2J9 529 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 ATXN7L1Q9ULK2 861 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-210ENST00000515420 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 PCDHGA7Q9Y5G6 932 aa12.56□□□□□ -0.4
CLCN3-210ENST00000515420 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 C17orf113A0A1B0GUU1 675 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 MGAT4DA6NG13 374 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 OR2AG2A6NM03 316 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 QSOX1O00391 747 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 RRP8O43159 456 aaKnown RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TLX3O43711 291 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 POP7O75817 140 aaKnown RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 VIPP01282 170 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 GSTM1P09488 218 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ATP1B2P14415 290 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 BRAFP15056 766 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TPSB2P20231 275 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms