RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MORN1Q5T089 497 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ATG16L1Q676U5 607 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SUSD1Q6UWL2 747 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PAQR9Q6ZVX9 377 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DNAJB7Q7Z6W7 309 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 MTDHQ86UE4 582 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GALNT12Q8IXK2 581 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 NKAIN3Q8N8D7 197 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TP53I13Q8NBR0 393 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 MCUQ8NE86 351 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 NDRG1Q92597 394 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 C12orf43Q96C57 262 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PRR11Q96HE9 360 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CNBD2Q96M20 576 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GCNAQ96QF7 691 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 APOL6Q9BWW8 343 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TMPRSS4Q9NRS4 437 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 THG1LQ9NWX6 298 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PSAT1Q9Y617 370 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TTLL8A6PVC2 850 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ZBTB24O43167 697 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CSH1P0DML2 217 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CSH2P0DML3 217 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 GOT1P17174 413 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 F8A1P23610 371 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PTX3P26022 381 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 HOXC8P31273 242 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 FNTBP49356 437 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 SEC13P55735 322 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PEX6Q13608 980 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 TSC22D1Q15714 1073 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PDSS1Q5T2R2 415 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 KIAA0319Q5VV43 1072 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CES4AQ5XG92 561 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 GALNT18Q6P9A2 607 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 DHDDSQ86SQ9 333 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 GPR180Q86V85 440 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CHSY1Q86X52 802 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 MIB1Q86YT6 1006 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 P3H2Q8IVL5 708 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CLEC4FQ8N1N0 589 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 MARVELD2Q8N4S9 558 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 SRFBP1Q8NEF9 429 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 DNAJB8Q8NHS0 232 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 NT5C3BQ969T7 300 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ISOC1Q96CN7 298 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 BTBD9Q96Q07 612 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 NTMT1Q9BV86 223 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 BBS2Q9BXC9 721 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 DHX35Q9H5Z1 703 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 RANBP3Q9H6Z4 567 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 FZD10Q9ULW2 581 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PIN4Q9Y237 131 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 EIF3LQ9Y262 564 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 SCN10AQ9Y5Y9 1956 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 A0A0X1KG70 313 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 F5H423 210 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 C2CD2LO14523 706 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PTGESO14684 152 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 LPXNO60711 386 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 RFPL1O75677 317 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 APRTP07741 180 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM58BPP0C7Q3 252 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF23P17027 643 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 TPSB2P20231 275 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ETV5P41161 510 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CASP6P55212 293 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 PRKD1Q15139 912 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 TLR1Q15399 786 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 TPSAB1Q15661 275 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 BRMS1LQ5PSV4 323 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 CYB5R2Q6BCY4 276 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 IL31Q6EBC2 164 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 TRMT10BQ6PF06 316 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 STRADAQ7RTN6 431 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC26A11Q86WA9 606 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC37A3Q8NCC5 494 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ZBTB44Q8NCP5 570 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 GDPD5Q8WTR4 605 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 OXNAD1Q96HP4 312 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF221Q9UK13 617 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 INVSQ9Y283 1065 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 BOLA1Q9Y3E2 137 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 IPPQ9Y573 584 aa7.41□□□□□ -1.22
PDLIM5-219ENST00000514743 A0A0G2JMP0 313 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 H0Y626 953 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 CDC123O75794 336 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 IGHA2P01877 340 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 S100A9P06702 114 aaKnown RBP7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 SRGAP2BP0DMP2 458 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 STMN1P16949 149 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 PEX2P28328 305 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 PGM1P36871 562 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 PRIM2P49643 509 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 ARPP19P56211 112 aa7.4□□□□□ -1.22
PDLIM5-219ENST00000514743 ESRRGP62508 458 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms