RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 GM2AP17900 193 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 SLC1A6P48664 564 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 PGGT1BP53609 377 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 TAS2R38P59533 333 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 BST1Q10588 318 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 TECRLQ5HYJ1 363 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 CFAP157Q5JU67 520 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 PLEKHS1Q5SXH7 462 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 RAET1GQ6H3X3 334 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 PNCKQ6P2M8 343 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 ADAMTSL4Q6UY14 1074 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 FAM47EQ6ZV65 393 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 UBALD2Q8IYN6 164 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 KIRREL3Q8IZU9 778 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 CCDC197Q8NCU1 140 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 ASZ1Q8WWH4 475 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 FAM136AQ96C01 138 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 ERLEC1Q96DZ1 483 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 LINGO1Q96FE5 620 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 HIC2Q96JB3 615 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 CNDP1Q96KN2 507 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 MECRQ9BV79 373 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 C1QTNF2Q9BXJ5 285 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 RABEP2Q9H5N1 569 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 ALG9Q9H6U8 611 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 ARHGEF3Q9NR81 526 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 GALPQ9UBC7 116 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 RNF112Q9ULX5 631 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 MED16Q9Y2X0 877 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 COQ6Q9Y2Z9 468 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 PRSS21Q9Y6M0 314 aa15.79■□□□□ 0.12
NUP54-214ENST00000514307 IQCF5A8MTL0 148 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 FADS2P1A8MWK0 482 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 EBAG9O00559 213 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 GPR39O43194 453 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 ZBTB14O43829 449 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 DLX3O60479 287 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 KERAO60938 352 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 RNGTTO60942 597 aaKnown RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 IPO13O94829 963 aaKnown RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 CDK14O94921 469 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CHRNB1P11230 501 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 FGF3P11487 239 aaPredicted RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 IMPDH1P20839 514 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 COL9A1P20849 921 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CD72P21854 359 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CA5AP35218 305 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 GMPRP36959 345 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CCR3P51677 355 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 STARD6P59095 220 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 ABCE1P61221 599 aaKnown RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 KIAA1324Q6UXG2 1013 aaKnown RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 SYT13Q7L8C5 426 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 SPATA21Q7Z572 469 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 GPSM1Q86YR5 675 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 PGBD3Q8N328 593 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 SGF29Q96ES7 293 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 SEC16BQ96JE7 1060 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 MRGPRX1Q96LB2 322 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CCM2Q9BSQ5 444 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 SLC17A9Q9BYT1 436 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 TRIM54Q9BYV2 358 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 SGK2Q9HBY8 427 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 EML4Q9HC35 981 aaKnown RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 ITM2CQ9NQX7 267 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 NCKIPSDQ9NZQ3 722 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 KLHL14Q9P2G3 628 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 GPR34Q9UPC5 381 aa15.78■□□□□ 0.12
NUP54-214ENST00000514307 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.78■□□□□ 0.12
NUP54-214ENST00000514307 KANSL1LA0AUZ9 987 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 LRRC72A6NJI9 287 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 TK2O00142 265 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 BTN3A1O00481 513 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 INPP4BO15327 924 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 SNX3O60493 162 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 NPHS1O60500 1241 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 SNNO75324 88 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 HSPA4LO95757 839 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 S100BP04271 92 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 SBK3P0C264 359 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 ITGB6P18564 788 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 AOAHP28039 575 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 OXTRP30559 389 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 MAPK9P45984 424 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 NAGLUP54802 743 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 B4GALNT1Q00973 533 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 PLOD1Q02809 727 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 TFF2Q03403 129 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 IER5LQ5T953 404 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 TMEM220Q6QAJ8 160 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 NEK10Q6ZWH5 1172 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 PIWIL4Q7Z3Z4 852 aaKnown RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 ADAMTSL2Q86TH1 951 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 HORMAD1Q86X24 394 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 WDR75Q8IWA0 830 aaKnown RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 CPNE9Q8IYJ1 553 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 OR6Y1Q8NGX8 325 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 ASB2Q96Q27 587 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms