RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 DNAJC28Q9NX36 388 aa19.93■□□□□ 0.78
USP53-208ENST00000514305 VPS9D1Q9Y2B5 631 aa19.93■□□□□ 0.78
USP53-208ENST00000514305 TEX264Q9Y6I9 313 aa19.93■□□□□ 0.78
USP53-208ENST00000514305 CCDC78A2IDD5 438 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 H3BM21 787 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 TP73O15350 636 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 VEGFDO43915 354 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 SPAG6O75602 509 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 PIAS2O75928 621 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 VAPBO95292 243 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 HNRNPKP61978 463 aaKnown RBP eCLIP19.92■□□□□ 0.78
USP53-208ENST00000514305 XIAPP98170 497 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 PTPRCAPQ14761 206 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 ATP13A5Q4VNC0 1218 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 ENPP7Q6UWV6 458 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 SLC22A18ASQ8N1D0 253 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 OTUD6BQ8N6M0 293 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 FUBP1Q96AE4 644 aaKnown RBP19.92■□□□□ 0.78
USP53-208ENST00000514305 NRSN2Q9GZP1 204 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 CATSPERZQ9NTU4 200 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 ZDHHC18Q9NUE0 388 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 EVA1BQ9NVM1 165 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 UCKL1Q9NWZ5 548 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 VPS18Q9P253 973 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 CLCA2Q9UQC9 943 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 OR1A2Q9Y585 309 aa19.92■□□□□ 0.78
USP53-208ENST00000514305 SPTY2D1-AS1A0A0U1RR47 76 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 CCDC162PA2VCL2 907 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 TK2O00142 265 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 QSOX1O00391 747 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 INPP4BO15327 924 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 GOT2P00505 430 aaKnown RBP19.91■□□□□ 0.78
USP53-208ENST00000514305 MSH3P20585 1137 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 TNFRSF8P28908 595 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 MAGEA4P43358 317 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 CARSP49589 748 aaKnown RBP19.91■□□□□ 0.78
USP53-208ENST00000514305 TTPAP49638 278 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 ILF2Q12905 390 aaKnown RBP19.91■□□□□ 0.78
USP53-208ENST00000514305 PEX6Q13608 980 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
USP53-208ENST00000514305 PARGQ86W56 976 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 OR56A4Q8NGH8 313 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 COX14Q96I36 57 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 ZNF514Q96K75 400 aaPredicted RBP19.91■□□□□ 0.78
USP53-208ENST00000514305 ZNF778Q96MU6 729 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 TCF12Q99081 682 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 AGAP2Q99490 1192 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 COPS8Q99627 209 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 FAM167BQ9BTA0 163 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 NLGN3Q9NZ94 848 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 KLQ9UEF7 1012 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 SLC2A6Q9UGQ3 507 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 CELSR3Q9NYQ7 3312 aa19.91■□□□□ 0.78
USP53-208ENST00000514305 A0A087WV48 116 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 AGAP14A8MT82 685 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 FADS2P1A8MWK0 482 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 K7ESM1 405 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 CD3EAPO15446 510 aaKnown RBP19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A9O60656 530 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 TNFP01375 233 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A6P19224 532 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A1P22309 533 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A4P22310 534 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 AKT1P31749 480 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 PHBP35232 272 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A3P35503 534 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A5P35504 534 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 INSM1Q01101 510 aaPredicted RBP19.9■□□□□ 0.78
USP53-208ENST00000514305 PPARDQ03181 441 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 FRG1Q14331 258 aaKnown RBP19.9■□□□□ 0.78
USP53-208ENST00000514305 ITIH4Q14624 930 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 CRYMQ14894 314 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 TRADDQ15628 312 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 MSS51Q4VC12 460 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 ANKMY2Q8IV38 441 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 CACTIN-AS1Q8N1I8 211 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 NXPE1Q8N323 547 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 LRRN4CLQ8ND94 238 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 DDHD1Q8NEL9 900 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 GSDMBQ8TAX9 411 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 CDKL2Q92772 493 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 CFAP36Q96G28 342 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 DUSP23Q9BVJ7 150 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 SUDS3Q9H7L9 328 aaPredicted RBP19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A7Q9HAW7 530 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A10Q9HAW8 530 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 UGT1A8Q9HAW9 530 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 GPR27Q9NS67 375 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 C20orf96Q9NUD7 363 aaPredicted RBP19.9■□□□□ 0.78
USP53-208ENST00000514305 ZDHHC3Q9NYG2 299 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 MOSPD1Q9UJG1 213 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 NFU1Q9UMS0 254 aa19.9■□□□□ 0.78
USP53-208ENST00000514305 RASGRP1O95267 797 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 SOD1P00441 154 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 CKMT1AP12532 417 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 ZNF7P17097 686 aaPredicted RBP19.89■□□□□ 0.77
USP53-208ENST00000514305 ACRV1P26436 265 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 ABCG1P45844 678 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 ARSDP51689 593 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms