RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TEDDM1Q5T9Z0 273 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CNSTQ6PJW8 725 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 SLC30A9Q6PML9 568 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CCNI2Q6ZMN8 369 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 FAM83HQ6ZRV2 1179 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 C3orf62Q6ZUJ4 267 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 KANSL1Q7Z3B3 1105 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 C11orf96Q7Z7L8 435 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 NRROSQ86YC3 692 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CILP2Q8IUL8 1156 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 SLC25A45Q8N413 288 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 ZNF548Q8NEK5 533 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 DTX3LQ8TDB6 740 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.17□□□□□ -0.624e-10■■■■■ 86.3
HTT-213ENST00000513806 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 ATXN7L3BQ96GX2 97 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 TTC25Q96NG3 672 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CAMK1GQ96NX5 476 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 OR2M4Q96R27 311 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 C19orf43Q9BQ61 176 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 PARD6BQ9BYG5 372 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 SLC13A1Q9BZW2 595 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 ERVMER34-1Q9H9K5 563 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 PSAT1Q9Y617 370 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 GVINP1Q7Z2Y8 2422 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 TRBV23OR9-2A0A075B6M9 112 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 TNFRSF10CO14798 259 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 CHUKO15111 745 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 AQP9O43315 295 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 VEGFDO43915 354 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 SNX2O60749 519 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 LRP3O75074 770 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 NDUFS3O75489 264 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
HTT-213ENST00000513806 TTC4O95801 387 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 S1PR4O95977 384 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 GIMD1P0DJR0 217 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 RXRGP48443 463 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 CCT8P50990 548 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 NFE2L1Q14494 772 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 SEPT7Q16181 437 aaKnown RBP11.16□□□□□ -0.62
HTT-213ENST00000513806 INSCQ1MX18 579 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 TYSND1Q2T9J0 566 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 RBM20Q5T481 1227 aaKnown RBP11.16□□□□□ -0.62
HTT-213ENST00000513806 MRNIPQ6NTE8 343 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 ZNF549Q6P9A3 640 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 IL27RAQ6UWB1 636 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 TAF8Q7Z7C8 310 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 LRRTM4Q86VH4 590 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 C2CD4AQ8NCU7 369 aaPredicted RBP11.16□□□□□ -0.62
HTT-213ENST00000513806 ACVR1CQ8NER5 493 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 GPR150Q8NGU9 434 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 PATE1Q8WXA2 126 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 LPGAT1Q92604 370 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 ZBTB9Q96C00 473 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 SGSM3Q96HU1 749 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 NDNQ99608 321 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 FOXP3Q9BZS1 431 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 OSGEPL1Q9H4B0 414 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 TMEM9BQ9NQ34 198 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 KLC4Q9NSK0 619 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 MOCS1Q9NZB8 636 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 SIRPGQ9P1W8 387 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 VPS18Q9P253 973 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 FBXO5Q9UKT4 447 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 DGKBQ9Y6T7 804 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 ASXL3Q9C0F0 2248 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 RP1P56715 2156 aa11.16□□□□□ -0.62
HTT-213ENST00000513806 H3BM21 787 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 TRIM38O00635 465 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 NIPSNAP2O75323 286 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 AHSGP02765 367 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 ZNF7P17097 686 aaPredicted RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 OGNP20774 298 aaKnown RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 TNFRSF8P28908 595 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 ARRB1P49407 418 aaPredicted RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 TTPAP49638 278 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 PMS2P54278 862 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 HNRNPKP61978 463 aaKnown RBP eCLIP11.15□□□□□ -0.62
HTT-213ENST00000513806 MGAT5Q09328 741 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 ITIH4Q14624 930 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 KBTBD12Q3ZCT8 623 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 STPG1Q5TH74 334 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 SDCCAG8Q86SQ7 713 aaPredicted RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 CCNJLQ8IV13 435 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 EID2Q8N6I1 236 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
HTT-213ENST00000513806 BIRC8Q96P09 236 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 FAM167BQ9BTA0 163 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 TXLNGYQ9BZA5 131 aa11.15□□□□□ -0.62
HTT-213ENST00000513806 FAM129AQ9BZQ8 928 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms