RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MFSD4BQ5TF39 518 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CCDC81Q6ZN84 652 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 PAQR9Q6ZVX9 377 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 APLFQ8IW19 511 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ADHFE1Q8IWW8 467 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC22A17Q8WUG5 538 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 PPM1MQ96MI6 270 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 C6orf203Q9P0P8 240 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 RREB1Q92766 1687 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 WFS1O76024 890 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ANXA6P08133 673 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 PRDX6P30041 224 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC26A3P40879 764 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CRATP43155 626 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 MOGSQ13724 837 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 TMPRSS11BQ86T26 416 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 PIM3Q86V86 326 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CLHC1Q8NHS4 586 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CEP295NLQ96MC4 621 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF778Q96MU6 729 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 HPS4Q9NQG7 708 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ARHGEF3Q9NR81 526 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 SIRPGQ9P1W8 387 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 A0A088AWK7 358 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 FFAR2O15552 330 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 DNAJB1P25685 340 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SERPINB10P48595 397 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 RPL26P61254 145 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 CHIT1Q13231 466 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 RAB33AQ14088 237 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF438Q7Z4V0 828 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF366Q8N895 744 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SKA1Q96BD8 255 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 FERD3LQ96RJ6 166 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 NLNQ9BYT8 704 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SGK2Q9HBY8 427 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 ZDHHC3Q9NYG2 299 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 EVPLQ92817 2033 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 C2orf78A6NCI8 922 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 M0R3G1 203 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 TNFAIP8O95379 198 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 C8GP07360 202 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC9B1Q4ZJI4 515 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 TMEM198Q66K66 360 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 TRNP1Q6NT89 227 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC30A9Q6PML9 568 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 CDHR3Q6ZTQ4 885 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 PLD6Q8N2A8 252 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 CYB5D2Q8WUJ1 264 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
PCDHA4-202ENST00000512229 C9JVG2 144 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 WNT9AO14904 365 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 HS6ST1O60243 411 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 GSTM1P09488 218 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 IL5RAQ01344 420 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 GPR141Q7Z602 305 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 AHI1Q8N157 1196 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 PEX13Q92968 403 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 RMND5BQ96G75 393 aaPredicted RBP12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 ITCHQ96J02 903 aa12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.34
PCDHA4-202ENST00000512229 H0Y858 1186 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 KERAO60938 352 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 BMP10O95393 424 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 KIR3DL1P43629 444 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 FBXW4P57775 412 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 ERVK-21P61565 698 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 PDGFRLQ15198 375 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 ZNF783Q6ZMS7 281 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 R3HCC1LQ7Z5L2 792 aaKnown RBP12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 MAGEE2Q8TD90 523 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 RIPOR3Q96MK2 946 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 PSMD13Q9UNM6 376 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 DYRK3O43781 588 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 ADH5P11766 374 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 PRKAG1P54619 331 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 TNK2Q07912 1038 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 LDLRAP1Q5SW96 308 aa12.95□□□□□ -0.34
PCDHA4-202ENST00000512229 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms