RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 COPZ2Q9P299 210 aa4.9□□□□□ -1.62
PTPN13-209ENST00000511467 RUVBL2Q9Y230 463 aaKnown RBP4.9□□□□□ -1.62
PTPN13-209ENST00000511467 PRELID3BQ9Y3B1 194 aa4.9□□□□□ -1.62
PTPN13-209ENST00000511467 WASHC1A8K0Z3 465 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LACTBL1A8MY62 500 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 WASH3PC4AMC7 463 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LSM1O15116 133 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF217O75362 1048 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 CCNE2O96020 404 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 HDCP19113 662 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 MPIP34949 423 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ARPP19P56211 112 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 MC1RQ01726 317 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 SLC13A2Q13183 592 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 CATSPEREQ5SY80 951 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 KIAA1161Q6NSJ0 714 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 WASH2PQ6VEQ5 465 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ACOT1Q86TX2 421 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ZSWIM9Q86XI8 627 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 RTL3Q8N8U3 475 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 C11orf65Q8NCR3 313 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 OR8K5Q8NH50 307 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 OXER1Q8TDS5 423 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF483Q8TF39 744 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 C12orf66Q96MD2 445 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 HIPK3Q9H422 1215 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 GPN1Q9HCN4 374 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FKBP14Q9NWM8 211 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LRRK1Q38SD2 2015 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 KIAA2026Q5HYC2 2103 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FYNP06241 537 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 HGFP14210 728 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 PRPS1L1P21108 318 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 NOS3P29474 1203 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 EIF2DP41214 584 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LRRC55Q6ZSA7 311 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF605Q86T29 641 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 CCNL2Q96S94 520 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 HGH1Q9BTY7 390 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 NT5MQ9NPB1 228 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 CAB39Q9Y376 341 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 TESMINQ9Y4I5 508 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 A0A096LPK6 155 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 UBE2QL1A1L167 161 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LOC110117498-PIK3R3F6TDL0 507 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 C8BP07358 591 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 LYNP07948 512 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FAM133BQ5BKY9 247 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 MANEAQ5SRI9 462 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FAXCQ5TGI0 409 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ANO7Q6IWH7 933 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FAM117BQ6P1L5 589 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM110Q86TL2 294 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 SLC47A2Q86VL8 602 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 C8orf59Q8N0T1 100 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 PGAM4Q8N0Y7 254 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 PARP8Q8N3A8 854 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 WDR36Q8NI36 951 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 ITFG1Q8TB96 612 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM234Q8WY98 164 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 PIK3R3Q92569 461 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 OMA1Q96E52 524 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 DENND2DQ9H6A0 471 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 SARS2Q9NP81 518 aaKnown RBP4.9□□□□□ -1.63
PTPN13-209ENST00000511467 STXBP5LQ9Y2K9 1186 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 COMMD3-BMI1R4GMX3 469 aa4.9□□□□□ -1.63
PTPN13-209ENST00000511467 TRIM49BA6NDI0 452 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FAM155AB1AL88 458 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 PPM1BO75688 479 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 STK16O75716 305 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FDPSP14324 419 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ACPPP15309 386 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GJA1P17302 382 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 LRPAP1P30533 357 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 KCNJ1P48048 391 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GJA9P57773 515 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 C2orf80Q0P641 193 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SMCO1Q147U7 214 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TRIP13Q15645 432 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 PDZK1Q5T2W1 519 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 EEPD1Q7L9B9 569 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CARFQ8N187 725 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FBXO36Q8NEA4 188 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GRPEL2Q8TAA5 225 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TEX47Q8TBZ9 253 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 KBTBD7Q8WVZ9 684 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 DDX17Q92841 729 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 OSTF1Q92882 214 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TMCO6Q96DC7 493 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 KCTD15Q96SI1 283 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 LRRC1Q9BTT6 524 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 THTPAQ9BU02 230 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 DUSP23Q9BVJ7 150 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TKTL2Q9H0I9 626 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 THAP2Q9H0W7 228 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms