RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SLC1A2P43004 574 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 MAGEA3P43357 314 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 SUOXP51687 545 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 AFF3P51826 1226 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 CTSCP53634 463 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 NXPH1P58417 271 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 PFN3P60673 137 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CDK16Q00536 496 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 B4GALNT1Q00973 533 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 EIF2B5Q13144 721 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 NFATC2Q13469 925 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 COL9A2Q14055 689 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 FZD2Q14332 565 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 NFATC4Q14934 902 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 LONRF1Q17RB8 773 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 HLA-BQ31612 363 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 GLE1Q53GS7 698 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 FASTKD1Q53R41 847 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 PRRT3Q5FWE3 981 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 NEPROQ6NW34 567 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 NEK5Q6P3R8 708 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CNSTQ6PJW8 725 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 SLC30A9Q6PML9 568 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 AFTPHQ6ULP2 937 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 C3orf62Q6ZUJ4 267 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CHST15Q7LFX5 561 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 ADGRG6Q86SQ4 1221 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 HOOK3Q86VS8 718 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 KCNMB4Q86W47 210 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 TRAPPC5Q8IUR0 188 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 SYT12Q8IV01 421 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 KIAA2013Q8IYS2 634 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 NRSN1Q8IZ57 195 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CBARPQ8N350 705 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 TRAM1L1Q8N609 369 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 LILRA3Q8N6C8 439 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 RASGEF1AQ8N9B8 481 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 ACVR1CQ8NER5 493 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 OR4L1Q8NH43 312 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 OR2W6PQ8NHA6 318 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 C1orf216Q8TAB5 229 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 LMX1AQ8TE12 382 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 FBF1Q8TES7 1133 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 UBLCP1Q8WVY7 318 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 JPH3Q8WXH2 748 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 DNASE2BQ8WZ79 361 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 GLYATL1Q969I3 302 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 HSH2DQ96JZ2 352 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CAMK1GQ96NX5 476 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 KIFC1Q9BW19 673 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 UNKQ9C0B0 810 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 TMEM168Q9H0V1 697 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CDC42EP4Q9H3Q1 356 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 OSGEPL1Q9H4B0 414 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 TRABDQ9H4I3 376 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 GAREM1Q9H706 876 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 PHPT1Q9NRX4 125 aaPredicted RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 TREX1Q9NSU2 369 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 CATSPERZQ9NTU4 200 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 GALPQ9UBC7 116 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 KLQ9UEF7 1012 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 MTRF1LQ9UGC7 380 aaKnown RBP5.34□□□□□ -1.55
PROM1-211ENST00000511153 CIDEBQ9UHD4 219 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 SUFUQ9UMX1 484 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 PSMD13Q9UNM6 376 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 PSAT1Q9Y617 370 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 TEX264Q9Y6I9 313 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 ANKRD12Q6UB98 2062 aa5.34□□□□□ -1.55
PROM1-211ENST00000511153 ARHGEF17Q96PE2 2063 aaPredicted RBP5.34□□□□□ -1.56
PROM1-211ENST00000511153 PRAMEF33A0A0G2JMD5 474 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 PRSS38A1L453 326 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 SLC35F4A4IF30 521 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 KRT87PA6NCN2 255 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 POC1B-GALNT4F8VUJ3 575 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 PSMD11O00231 422 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 KHNYNO15037 678 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 PPFIA2O75334 1257 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 NDUFS3O75489 264 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 USP1O94782 785 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 CDK14O94921 469 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 SHBGP04278 402 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 CEACAM5P06731 702 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 MLNP12872 115 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 TSHRP16473 764 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 CNR2P34972 360 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 PREPP48147 710 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 ARCN1P48444 511 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 ATXN3P54252 364 aaPredicted RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 PMS2P54278 862 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 DRG2P55039 364 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 SRP54P61011 504 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 RACK1P63244 317 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 CACNG1Q06432 222 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 BMPR2Q13873 1038 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 DUOXA1Q1HG43 343 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 DEFB133Q30KQ1 61 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 AASDHQ4L235 1098 aaPredicted RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 RBM20Q5T481 1227 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 LAIR1Q6GTX8 287 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 DUS1LQ6P1R4 473 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms