RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 CMAHPQ9Y471 501 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 INSL5Q9Y5Q6 135 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 MAGED1Q9Y5V3 778 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 PHRF1Q9P1Y6 1649 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 SIPA1L3O60292 1781 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 USP6P35125 1406 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 NCAPD2Q15021 1401 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 CAMTA1Q9Y6Y1 1673 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 MAP3K19Q56UN5 1328 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 PASKQ96RG2 1323 aa3.17□□□□□ -1.9
CALCOCO2-216ENST00000509784 LAMA4Q16363 1823 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ECM29Q5VYK3 1845 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PARP4Q9UKK3 1724 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 FLT4P35916 1363 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 LY6G6EA0A0G2JKS1 128 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 A0A1B0GVM2 712 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 A0A1B0GVT2 93 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 OR2A25A4D2G3 310 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 CCDC69A6NI79 296 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 USP27XA6NNY8 438 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 VWA5AO00534 786 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 SOCS2O14508 198 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PPEF2O14830 753 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TNFRSF13BO14836 293 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 OGG1O15527 345 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ASAP2O43150 1006 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ADAM20O43506 726 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZIC3O60481 467 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 LCATP04180 440 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM191BP0C7N4 346 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 NR2F1P10589 423 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PSG1P11464 419 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 CASTP20810 708 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 MAOAP21397 527 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 HOXA13P31271 388 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 RPL3P39023 403 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PRCPP42785 496 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 HSD17B4P51659 736 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 GSDMDP57764 484 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 MRPS5P82675 430 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZBED6P86452 979 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 CDC16Q13042 620 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PCLAFQ15004 111 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 RRS1Q15050 365 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PNLIPRP3Q17RR3 467 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM266Q2M3C6 531 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PCGF3Q3KNV8 242 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 IGSF11Q5DX21 431 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM198Q66K66 360 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TYW3Q6IPR3 259 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 NAA16Q6N069 864 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 DPY19L2P1Q6NXN4 242 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC30A6Q6NXT4 461 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 METTL2BQ6P1Q9 378 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 C11orf57Q6ZUT1 292 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 SDCCAG8Q86SQ7 713 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PRPF39Q86UA1 669 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 KBTBD6Q86V97 674 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZC3HC1Q86WB0 502 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 DSELQ8IZU8 1212 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 AADATQ8N5Z0 425 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 IL17RCQ8NAC3 791 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 APPL2Q8NEU8 664 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 METTL2AQ96IZ6 378 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PAFAH2Q99487 392 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 UBXN6Q9BZV1 441 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 KCNN2Q9H2S1 579 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PIGMQ9H3S5 423 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 IL1RAPL2Q9NP60 686 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 GIMAP4Q9NUV9 329 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ARHGEF38Q9NXL2 777 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 COPG2Q9UBF2 871 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 SEC63Q9UGP8 760 aaKnown RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TSPYL4Q9UJ04 414 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 TTC7AQ9ULT0 858 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 CLIC4Q9Y696 253 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 V9GYY5 206 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 ADAMTS7Q9UKP4 1686 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 PHLPP2Q6ZVD8 1323 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 IGSF1Q8N6C5 1336 aa3.16□□□□□ -1.9
CALCOCO2-216ENST00000509784 COL22A1Q8NFW1 1626 aaPredicted RBP3.15□□□□□ -1.9
CALCOCO2-216ENST00000509784 METP08581 1390 aa3.15□□□□□ -1.9
CALCOCO2-216ENST00000509784 ERICH4A6NGS2 130 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 DNAJC9-AS1A6NH13 148 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 LRRC72A6NJI9 287 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 H3BNX3 289 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 CTAGE5O15320 804 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 HSPA12AO43301 675 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 ATP8B1O43520 1251 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 RGS14O43566 566 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 SPRY3O43610 288 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 HTATSF1O43719 755 aaKnown RBP3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 MITFO75030 526 aaPredicted RBP3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 KCNK5O95279 499 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 EGFP01133 1207 aa3.15□□□□□ -1.91
CALCOCO2-216ENST00000509784 HIST1H2ABP04908 130 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms