RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CCNL2Q96S94 520 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ECSITQ9BQ95 431 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NUDT16L1Q9BRJ7 211 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLC39A8Q9C0K1 460 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RBM22Q9NW64 420 aaKnown RBP eCLIP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NDE1Q9NXR1 346 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IFT80Q9P2H3 777 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SNX10Q9Y5X0 201 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 A0A096LPK6 155 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQU0 124 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 E9PBE3 544 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 QSOX1O00391 747 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PPEF2O14830 753 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CSO75390 466 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IFNA14P01570 189 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FGGP02679 453 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CYP17A1P05093 508 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 KITP10721 976 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FBLP22087 321 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 DLSTP36957 453 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SKIV2L2P42285 1042 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TOB1P50616 345 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 GRIK2Q13002 908 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 STX5Q13190 355 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NFE2L1Q14494 772 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IL17AQ16552 155 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FXNQ16595 210 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 AGAP9Q5VTM2 703 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CNSTQ6PJW8 725 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FAM151BQ6UXP7 276 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PTRH1Q86Y79 214 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 GATAD2AQ86YP4 633 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PLXDC1Q8IUK5 500 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MPP5Q8N3R9 675 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 OR5B17Q8NGF7 314 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 REPS1Q96D71 796 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZHX1-C8orf76Q96EF9 292 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C19orf60Q96EN9 201 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SERPINB12Q96P63 405 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PREBQ9HCU5 417 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZIM2Q9NZV7 527 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 COPS7AQ9UBW8 275 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LHX6Q9UPM6 363 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SNX11Q9Y5W9 270 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SPTBN1Q01082 2364 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1B0GVT2 93 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LDB2O43679 373 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF623O75123 536 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CALCAP01258 141 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C4BPAP04003 597 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LYNP07948 512 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 H2AFXP16104 143 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ABOP16442 354 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 POLD2P49005 469 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ACADVLP49748 655 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NEK2P51955 445 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RUNX1T1Q06455 604 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 STX4Q12846 297 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HTR4Q13639 388 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CBFBQ13951 182 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SEMA3AQ14563 771 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 DSC3Q14574 896 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RCN1Q15293 331 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SOWAHAQ2M3V2 549 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLC9A4Q6AI14 798 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC8EQ6NSJ5 796 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 VASH1Q7L8A9 365 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 STRADAQ7RTN6 431 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TSEN2Q8NCE0 465 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HIPK4Q8NE63 616 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TNIP2Q8NFZ5 429 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PSMA8Q8TAA3 256 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RIN3Q8TB24 985 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SORCS1Q8WY21 1168 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RIT1Q92963 219 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TRIM4Q9C037 500 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 KATNBL1Q9H079 304 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC134Q9H6E4 229 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SEMA4GQ9NTN9 838 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HPF1Q9NWY4 346 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ACTR10Q9NZ32 417 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 F5P12259 2224 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FLRT2O43155 660 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 VEGFDO43915 354 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MT-CYBP00156 380 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF8P17098 575 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TCN2P20062 427 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ADSSP30520 456 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ASPAP45381 313 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CPA2P48052 419 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ARSEP51690 589 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RAD23AP54725 363 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TBL3Q12788 808 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CSTF3Q12996 717 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PDIA2Q13087 525 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MYLK3Q32MK0 819 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ADGRF1Q5T601 910 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 METTL21CQ5VZV1 264 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C4orf22Q6V702 233 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RNF44Q7L0R7 432 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms