RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SERPINA9Q86WD7 417 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 TMEM126BQ8IUX1 230 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 ZFP28Q8NHY6 868 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.11
DDX41-208ENST00000507955 MYO19Q96H55 970 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 PIF1Q9H611 641 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 ASB8Q9H765 288 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 ZNF696Q9H7X3 374 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 INTS6Q9UL03 887 aaKnown RBP14.33□□□□□ -0.11
DDX41-208ENST00000507955 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 DNAH14Q0VDD8 3507 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 E2F3O00716 465 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 NME4O00746 187 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 TGM5O43548 720 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 PGLSO95336 258 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 CNPP09543 421 aaKnown RBP14.33□□□□□ -0.12
DDX41-208ENST00000507955 HNF1BP35680 557 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 HMGCLP35914 325 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 HTR6P50406 440 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 ATP6V0D1P61421 351 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 UFM1P61960 85 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 PLIN5Q00G26 463 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 LMAN2Q12907 356 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 APOFQ13790 326 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
DDX41-208ENST00000507955 LETMD1Q6P1Q0 360 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 Q6ZNB5 142 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 IFNEQ86WN2 208 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 CMTM8Q8IZV2 173 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 NKAPQ8N5F7 415 aaKnown RBP14.33□□□□□ -0.12
DDX41-208ENST00000507955 HJURPQ8NCD3 748 aaPredicted RBP14.33□□□□□ -0.12
DDX41-208ENST00000507955 DNAJB14Q8TBM8 379 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 DLG3Q92796 817 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.12
DDX41-208ENST00000507955 IL26Q9NPH9 171 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 CD300AQ9UGN4 299 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 CCL26Q9Y258 94 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 COMMD10Q9Y6G5 202 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.12
DDX41-208ENST00000507955 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 HOXB8P17481 243 aaPredicted RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 LBPP18428 481 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 ERVPABLB-1P60509 514 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 MAPRE2Q15555 327 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 FUT11Q495W5 492 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 OTOP2Q7RTS6 562 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 MIER2Q8N344 545 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 ZNF689Q96CS4 500 aaPredicted RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 P2RY12Q9H244 342 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 Q9H521 79 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 ZFYVE1Q9HBF4 777 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 MRPL17Q9NRX2 175 aaKnown RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 HCFC1R1Q9NWW0 138 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 TMEM181Q9P2C4 612 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 ZMYM5Q9UJ78 669 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 USP22Q9UPT9 525 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 RNF11Q9Y3C5 154 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 SNX13Q9Y5W8 968 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 GRIA3P42263 894 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 RABL3Q5HYI8 236 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 CNKSR3Q6P9H4 555 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 MBOAT1Q6ZNC8 495 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 SLC22A17Q8WUG5 538 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 KCNJ9Q92806 393 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 APOL5Q9BWW9 433 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
DDX41-208ENST00000507955 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
DDX41-208ENST00000507955 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 SYCE1LA8MT33 242 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 TNFAIP8O95379 198 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 NELFEP18615 380 aaKnown RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 ATP6V1B2P21281 511 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 PTGER3P43115 390 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 PAGE3Q5JUK9 113 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 PTRHD1Q6GMV3 140 aaKnown RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 TCEAL8Q8IYN2 117 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 ADGRG2Q8IZP9 1017 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 RIN3Q8TB24 985 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 GRIN3AQ8TCU5 1115 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 MRPS26Q9BYN8 205 aaKnown RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 COQ10BQ9H8M1 238 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 SPG21Q9NZD8 308 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 DNMT3BQ9UBC3 853 aaKnown RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 MBD1Q9UIS9 605 aaPredicted RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 SARDHQ9UL12 918 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 AP4S1Q9Y587 144 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 TYW5A2RUC4 315 aaKnown RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 ASPDHA6ND91 283 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 FXYD1O00168 92 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 PRMT5O14744 637 aaPredicted RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 ANGPT2O15123 496 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 TPST1O60507 370 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 TIPRLO75663 272 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 SLC25A14O95258 325 aaPredicted RBP14.31□□□□□ -0.12
DDX41-208ENST00000507955 ESRRBO95718 433 aa14.31□□□□□ -0.12
DDX41-208ENST00000507955 BPIP17213 487 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms