RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 CTCFP49711 727 aaPredicted RBP3.18□□□□□ -1.9
LINC01088-204ENST00000507761 CTSCP53634 463 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SNRPD1P62314 119 aaKnown RBP3.18□□□□□ -1.9
LINC01088-204ENST00000507761 VAMP2P63027 116 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 PTP4A2Q12974 167 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 CDC16Q13042 620 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 TAF12Q16514 161 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 BAK1Q16611 211 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 GTDC1Q4AE62 458 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 RAB6CQ53S08 254 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SMAP1Q8IYB5 467 aaPredicted RBP3.18□□□□□ -1.9
LINC01088-204ENST00000507761 PM20D2Q8IYS1 436 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 CPXCR1Q8N123 301 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SCML4Q8N228 414 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 ZNF611Q8N823 705 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SAAL1Q96ER3 474 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SMC6Q96SB8 1091 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 SEMA3CQ99985 751 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 RHNO1Q9BSD3 238 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 RAB6CQ9H0N0 254 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 MAGIXQ9H6Y5 334 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 PTTG2Q9NZH5 202 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 ABI3Q9P2A4 366 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 DNAJB4Q9UDY4 337 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 ZHX2Q9Y6X8 837 aa3.18□□□□□ -1.9
LINC01088-204ENST00000507761 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
LINC01088-204ENST00000507761 C1orf226A1L170 272 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 NPHP1O15259 732 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 TNFSF14O43557 240 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 JRKO75564 520 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 NKX2-2O95096 273 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 ANXA7P20073 488 aaKnown RBP3.17□□□□□ -1.9
LINC01088-204ENST00000507761 WNT5AP41221 380 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 EIF3BP55884 814 aaKnown RBP3.17□□□□□ -1.9
LINC01088-204ENST00000507761 CDONQ4KMG0 1287 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 NDUFAF5Q5TEU4 345 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 NSUN5P2Q63ZY6 315 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 PWWP2BQ6NUJ5 590 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 SLC5A8Q8N695 610 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 EMC1Q8N766 993 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 MYRIPQ8NFW9 859 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 ZNRF4Q8WWF5 429 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 AGAP3Q96P47 875 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 RTP3Q9BQQ7 232 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 PLCXD1Q9NUJ7 323 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 COPG2Q9UBF2 871 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 ASIC3Q9UHC3 531 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 YIPF1Q9Y548 306 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 MAU2Q9Y6X3 613 aa3.17□□□□□ -1.9
LINC01088-204ENST00000507761 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 KANSL1LA0AUZ9 987 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 EIF3CLB5ME19 914 aaKnown RBP3.16□□□□□ -1.9
LINC01088-204ENST00000507761 SRSF10O75494 262 aaKnown RBP3.16□□□□□ -1.9
LINC01088-204ENST00000507761 KCNK5O95279 499 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 BMP10O95393 424 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 HSD3B1P14060 373 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 PRCPP42785 496 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 TRPC3Q13507 836 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 PNLIPRP3Q17RR3 467 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 SNAI3Q3KNW1 292 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 ZNF805Q5CZA5 627 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 FAM69AQ5T7M9 428 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 TSSK4Q6SA08 328 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 ISCA2Q86U28 154 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 PTOV1Q86YD1 416 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 GCSAMQ8N6F7 178 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 SLC38A9Q8NBW4 561 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 OR2T12Q8NG77 320 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 HM13Q8TCT9 377 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 GIMAP5Q96F15 307 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 ZNF300Q96RE9 604 aaPredicted RBP3.16□□□□□ -1.9
LINC01088-204ENST00000507761 TMEM39BQ9GZU3 492 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 COQ3Q9NZJ6 369 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 CAMK2AQ9UQM7 478 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 CLIC4Q9Y696 253 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 CAPN7Q9Y6W3 813 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 ADAMTS9Q9P2N4 1935 aa3.16□□□□□ -1.9
LINC01088-204ENST00000507761 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 A0A087WW49 117 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 A0A1W2PNU3 283 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-204ENST00000507761 PIP5K1CO60331 668 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 GPR137BO60478 399 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 TRMUO75648 421 aaKnown RBP3.15□□□□□ -1.91
LINC01088-204ENST00000507761 CSPG5O95196 566 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 CEBPBP17676 345 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 NFKBIAP25963 317 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 EPHA2P29317 976 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 SLC6A12P48065 614 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 MMP15P51511 669 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 HSP90AB4PQ58FF6 505 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 ARHGEF16Q5VV41 709 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 BSPRYQ5W0U4 402 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 FASTKD5Q7L8L6 764 aaKnown RBP3.15□□□□□ -1.91
LINC01088-204ENST00000507761 PLD3Q8IV08 490 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 C1orf52Q8N6N3 182 aaKnown RBP3.15□□□□□ -1.91
LINC01088-204ENST00000507761 NFKBIDQ8NI38 313 aa3.15□□□□□ -1.91
LINC01088-204ENST00000507761 TMEM143Q96AN5 459 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms