RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PFKFB4Q16877 469 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 DCAF4L1Q3SXM0 396 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 SYT6Q5T7P8 510 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 DLEU7Q6UYE1 221 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 PAGE2Q7Z2X7 111 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 KDELC2Q7Z4H8 507 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 FAM86B1Q8N7N1 296 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 APPL2Q8NEU8 664 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 TRPM4Q8TD43 1214 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 ULBP1Q9BZM6 244 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 SMPD4Q9NXE4 827 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 OSGIN1Q9UJX0 560 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 FAM234BA2RU67 622 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 GRXCR2A6NFK2 248 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 XPNPEP2O43895 674 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 KRT75O95678 551 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 S1PR4O95977 384 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 DAOAP59103 153 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 LCP2Q13094 533 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 SELPLGQ14242 412 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 OR4D1Q15615 310 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 PRR23BQ6ZRT6 265 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 SVOPQ8N4V2 548 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 COPS5Q92905 334 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 TP53INP1Q96A56 240 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 PPP1R2P1Q96PQ5 205 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 TKTL2Q9H0I9 626 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 TRIT1Q9H3H1 467 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 WDCPQ9H6R7 721 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ANKHQ9HCJ1 492 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 RNF19AQ9NV58 838 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ERAP1Q9NZ08 941 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 C3orf18Q9UK00 162 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 SLC16A6O15403 523 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 MAFKO60675 156 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 IL18R1Q13478 541 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ZNF181Q2M3W8 571 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 XKR7Q5GH72 579 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 LDB1Q86U70 411 aaPredicted RBP16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 OSTM1Q86WC4 334 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 LRRC49Q8IUZ0 686 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ARHGAP12Q8IWW6 846 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ELMOD1Q8N336 334 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ATPAF2Q8N5M1 289 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 MCOLN3Q8TDD5 553 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 REXO5Q96IC2 774 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 UGT2B28Q9BY64 529 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 NACA2Q9H009 215 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 NEK6Q9HC98 313 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ABCB10Q9NRK6 738 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 ZIM2Q9NZV7 527 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 PCDHGA10Q9Y5H3 936 aa16.92■□□□□ 0.3
SQSTM1-211ENST00000506690 SYCE1LA8MT33 242 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 MATN3O15232 486 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 CST1P01037 141 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 HLA-DQB2P05538 268 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 BMP1P13497 986 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 CASP3P42574 277 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 CXCR3P49682 368 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 KCTD2Q14681 263 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 NKG7Q16617 165 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 LBX2Q6XYB7 198 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 USP43Q70EL4 1123 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 RHEBL1Q8TAI7 183 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 CNIH3Q8TBE1 160 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 FAM49AQ9H0Q0 323 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 EXD2Q9NVH0 621 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 TMEM45AQ9NWC5 275 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ERVK-18Q9QC07 812 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 SLC7A4O43246 635 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 FDXRP22570 491 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 GRIK1P39086 918 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 MAP2K4P45985 399 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ARPC4P59998 168 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 FPGSQ05932 587 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 STEAP3Q658P3 488 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 AGMOQ6ZNB7 445 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ZFAND4Q86XD8 727 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 RYBPQ8N488 228 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 PROKR1Q8TCW9 393 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 CCDC115Q96NT0 180 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 TMEM209Q96SK2 561 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 DUSP21Q9H596 190 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 GORASP2Q9H8Y8 452 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 ARNT2Q9HBZ2 717 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 EVLQ9UI08 416 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 NEU3Q9UQ49 428 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 TIMM22Q9Y584 194 aa16.91■□□□□ 0.3
SQSTM1-211ENST00000506690 SAGE2PA6NJ88 616 aa16.9■□□□□ 0.3
SQSTM1-211ENST00000506690 A6NL46 340 aa16.9■□□□□ 0.3
SQSTM1-211ENST00000506690 AREL1O15033 823 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms