RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ATP5DP30049 168 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 PIGAP37287 484 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 GDF5P43026 501 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 RASSF2P50749 326 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 PROK1P58294 105 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SIRPAP78324 504 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 NHLH1Q02575 133 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 RALGDSQ12967 914 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 MAD2L1Q13257 205 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 LAMB3Q13751 1172 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ARMC4Q5T2S8 1044 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SLC18B1Q6NT16 456 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SHQ1Q6PI26 577 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 MFSD6Q6ZSS7 791 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 INTS8Q75QN2 995 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ERN2Q76MJ5 926 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SHFQ7M4L6 423 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 HAUS6Q7Z4H7 955 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 LDB1Q86U70 411 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 CCDC190Q86UF4 302 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 IQCHQ86VS3 1027 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 IQCA1Q86XH1 822 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 XXYLT1Q8NBI6 393 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 OR1J2Q8NGS2 313 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 PRSS3P2Q8NHM4 247 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 HM13Q8TCT9 377 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 PIGOQ8TEQ8 1089 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TEKT4Q8WW24 435 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TRIB2Q92519 343 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 FAM162AQ96A26 154 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ARSGQ96EG1 525 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 CITED2Q99967 270 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 HGH1Q9BTY7 390 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TRMOQ9BU70 441 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 NUP85Q9BW27 656 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 GOLPH3LQ9H4A5 285 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SLITRK6Q9H5Y7 841 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 XAB2Q9HCS7 855 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 CHMP1AQ9HD42 196 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM51Q9NW97 253 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 HAO2Q9NYQ3 351 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 OR6C3Q9NZP0 311 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 FLRT1Q9NZU1 646 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 LARSQ9P2J5 1176 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TSPYL4Q9UJ04 414 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ACSL5Q9ULC5 683 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 COG5Q9UP83 839 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 WBP11Q9Y2W2 641 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 PAM16Q9Y3D7 125 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 RAI2Q9Y5P3 530 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TULP4Q9NRJ4 1543 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 SBNO1A3KN83 1393 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ARHGEF10O15013 1369 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 KIAA0232Q92628 1395 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZMYM2Q9UBW7 1377 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 NRAPQ86VF7 1730 aa3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.22□□□□□ -1.89
TRAPPC11-205ENST00000506426 ADGRB2O60241 1585 aa3.21□□□□□ -1.89
TRAPPC11-205ENST00000506426 ANKARQ7Z5J8 1434 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CKAP5Q14008 2032 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DLC1Q96QB1 1528 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 EIF4E1BA6NMX2 242 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCNU1A8MYU2 1149 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 E5RJQ4 531 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MS4A18H0YCH9 400 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 LDB2O43679 373 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ITM2AO43736 263 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLU7O95391 586 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 TGDSO95455 350 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRUB2O95900 331 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 NUDT3O95989 172 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PFKFB1P16118 471 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 GNLYP22749 145 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 NR2F2P24468 414 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MC5RP33032 325 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 EIF2S3P41091 472 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCR10P46092 362 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ME1P48163 572 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ALDH7A1P49419 539 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 P2RX3P56373 397 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SELENOVP59797 346 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZP1P60852 638 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CSNK2A1P68400 391 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DDR1Q08345 913 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MTX1Q13505 466 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 EIF2S3LQ2VIR3 472 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 WASHC2DQ5SRD0 308 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MANEAQ5SRI9 462 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DCST1Q5T197 706 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 C6orf163Q5TEZ5 329 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DCAF12L2Q5VW00 463 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC2A7Q6PXP3 512 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCSK4Q6UW60 755 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DLK2Q6UY11 383 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 B3GNT6Q6ZMB0 384 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRAPPC11Q7Z392 1133 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADCK2Q7Z695 626 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 YTHDF3Q7Z739 585 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SNX32Q86XE0 403 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms