RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 TSGA10Q9BZW7 698 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 FAM117AQ9C073 453 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 B3GNT4Q9C0J1 378 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 OSGEPL1Q9H4B0 414 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 UGT1A7Q9HAW7 530 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 UGT1A10Q9HAW8 530 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 UGT1A8Q9HAW9 530 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 GUCA1BQ9UMX6 200 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 ARL5AQ9Y689 179 aa17.03■□□□□ 0.32
SDHA-205ENST00000504824 KRT86O43790 486 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 SLC28A2O43868 658 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 ITGB2P05107 769 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 LPOP22079 712 aaPredicted RBP17.02■□□□□ 0.31
SDHA-205ENST00000504824 CSTF2P33240 577 aaKnown RBP eCLIP17.02■□□□□ 0.31
SDHA-205ENST00000504824 ETV5P41161 510 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 OLIG2Q13516 323 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 TRA2AQ13595 282 aaKnown RBP eCLIP17.02■□□□□ 0.31
SDHA-205ENST00000504824 ITGA9Q13797 1035 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 GTF2H3Q13889 308 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 PTPRCAPQ14761 206 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 C16orf72Q14CZ0 275 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 TAF1AQ15573 450 aaPredicted RBP17.02■□□□□ 0.31
SDHA-205ENST00000504824 PLA2G4EQ3MJ16 856 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 ZNF547Q8IVP9 402 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 FAM71DQ8N9W8 422 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 RCBTB1Q8NDN9 531 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 OR10G6Q8NH81 332 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 LRRC45Q96CN5 670 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 TIMM29Q9BSF4 260 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 FOXJ2Q9P0K8 574 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 CPNE7Q9UBL6 633 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 DNAJC16Q9Y2G8 782 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 SPTA1P02549 2419 aa17.02■□□□□ 0.31
SDHA-205ENST00000504824 TCRBV7S2A1N4TA0A589 114 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 STMND1H3BQB6 276 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 MPSTP25325 297 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 PARP6Q2NL67 630 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 LDLRAP1Q5SW96 308 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 TMEM71Q6P5X7 295 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 ARHGEF18Q6ZSZ5 1173 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 VASH2Q86V25 355 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 TRAPPC5Q8IUR0 188 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 OR4K2Q8NGD2 314 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 ZNF398Q8TD17 642 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 UBE2Q2Q8WVN8 375 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 CCDC74BQ96LY2 380 aa17.01■□□□□ 0.31
SDHA-205ENST00000504824 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.01■□□□□ 0.31
SDHA-205ENST00000504824 R3HDM2Q9Y2K5 976 aaKnown RBP17.01■□□□□ 0.31
SDHA-205ENST00000504824 C9orf172C9J069 976 aa17■□□□□ 0.31
SDHA-205ENST00000504824 GAPDHSO14556 408 aaPredicted RBP17■□□□□ 0.31
SDHA-205ENST00000504824 ARHGAP6O43182 974 aa17■□□□□ 0.31
SDHA-205ENST00000504824 DUX1O43812 170 aa17■□□□□ 0.31
SDHA-205ENST00000504824 CRTAMO95727 393 aa17■□□□□ 0.31
SDHA-205ENST00000504824 SFTPCP11686 197 aa17■□□□□ 0.31
SDHA-205ENST00000504824 VCLP18206 1134 aa17■□□□□ 0.31
SDHA-205ENST00000504824 XRCC1P18887 633 aaPredicted RBP17■□□□□ 0.31
SDHA-205ENST00000504824 IDSP22304 550 aa17■□□□□ 0.31
SDHA-205ENST00000504824 CSF2RBP32927 897 aa17■□□□□ 0.31
SDHA-205ENST00000504824 CA5AP35218 305 aa17■□□□□ 0.31
SDHA-205ENST00000504824 SPARCL1Q14515 664 aa17■□□□□ 0.31
SDHA-205ENST00000504824 PRICKLE2Q7Z3G6 844 aa17■□□□□ 0.31
SDHA-205ENST00000504824 RASGEF1AQ8N9B8 481 aa17■□□□□ 0.31
SDHA-205ENST00000504824 AGBL5Q8NDL9 886 aa17■□□□□ 0.31
SDHA-205ENST00000504824 SLC35B2Q8TB61 432 aa17■□□□□ 0.31
SDHA-205ENST00000504824 TAAR9Q96RI9 348 aa17■□□□□ 0.31
SDHA-205ENST00000504824 TBL1YQ9BQ87 522 aa17■□□□□ 0.31
SDHA-205ENST00000504824 ZCCHC2Q9C0B9 1178 aaKnown RBP17■□□□□ 0.31
SDHA-205ENST00000504824 ARNT2Q9HBZ2 717 aa17■□□□□ 0.31
SDHA-205ENST00000504824 TMEM9Q9P0T7 183 aa17■□□□□ 0.31
SDHA-205ENST00000504824 SCHIP1Q9P0W5 487 aaPredicted RBP17■□□□□ 0.31
SDHA-205ENST00000504824 KCTD3Q9Y597 815 aa17■□□□□ 0.31
SDHA-205ENST00000504824 SETXQ7Z333 2677 aaKnown RBP17■□□□□ 0.31
SDHA-205ENST00000504824 PRR19A6NJB7 356 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 PDZK1P1A8MUH7 402 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 GPR39O43194 453 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 KCNJ13O60928 360 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 METTL18O95568 372 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 CCL4P13236 92 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 EPHA4P54764 986 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 UBE2IP63279 158 aaKnown RBP16.99■□□□□ 0.31
SDHA-205ENST00000504824 PDE1BQ01064 536 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 NFATC3Q12968 1075 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 MSLNQ13421 630 aaPredicted RBP16.99■□□□□ 0.31
SDHA-205ENST00000504824 SEPT7Q16181 437 aaKnown RBP16.99■□□□□ 0.31
SDHA-205ENST00000504824 GPRC6AQ5T6X5 926 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 DENND5AQ6IQ26 1287 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
SDHA-205ENST00000504824 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 C11orf96Q7Z7L8 435 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 KLHDC8BQ8IXV7 354 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 DDHD1Q8NEL9 900 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 NCSTNQ92542 709 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 EXTL1Q92935 676 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 FEZ2Q9UHY8 353 aaPredicted RBP16.99■□□□□ 0.31
SDHA-205ENST00000504824 PCDHGA4Q9Y5G9 962 aa16.99■□□□□ 0.31
SDHA-205ENST00000504824 POP7O75817 140 aaKnown RBP16.98■□□□□ 0.31
SDHA-205ENST00000504824 PRAMEF1O95521 474 aa16.98■□□□□ 0.31
SDHA-205ENST00000504824 VIPP01282 170 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms