RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 STARD6P59095 220 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 TAS2R38P59533 333 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 RPS21P63220 83 aaKnown RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 TMEM115Q12893 351 aaPredicted RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 PCLAFQ15004 111 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 MLF2Q15773 248 aaPredicted RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 CHI3L2Q15782 390 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 TTLL9Q3SXZ7 439 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 TECRLQ5HYJ1 363 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 AGBL4Q5VU57 503 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 LIPMQ5VYY2 423 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 CWF19L1Q69YN2 538 aaKnown RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 KIAA1211LQ6NV74 962 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 SPATS2Q86XZ4 545 aaKnown RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 C10orf107Q8IVU9 208 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 HOMEZQ8IX15 550 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 AADATQ8N5Z0 425 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 ANKS4BQ8N8V4 417 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 PPP1R14CQ8TAE6 165 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 CD200R1Q8TD46 325 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 SIPA1Q96FS4 1042 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 ZNF514Q96K75 400 aaPredicted RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 CNDP1Q96KN2 507 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 C7orf26Q96N11 449 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 ELAC2Q9BQ52 826 aaKnown RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 WRAP53Q9BUR4 548 aaKnown RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 TRIM39Q9HCM9 518 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 CD248Q9HCU0 757 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 ZDHHC4Q9NPG8 344 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 FBXL12Q9NXK8 326 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 CD84Q9UIB8 345 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 MMP17Q9ULZ9 603 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.02□□□□□ -0.81
DDX41-203ENST00000504781 COL4A3Q01955 1670 aa10.02□□□□□ -0.81
DDX41-203ENST00000504781 PLRG1O43660 514 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 VEGFDO43915 354 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 DLX3O60479 287 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 NIPSNAP2O75323 286 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 PCDH8O95206 1070 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 TRIM16O95361 564 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 TOP3BO95985 862 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 FTH1P02794 183 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 TROVE2P10155 538 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDX41-203ENST00000504781 CHRNB1P11230 501 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 ACADMP11310 421 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 C6P13671 934 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 TFEBP19484 476 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 AOC1P19801 751 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 IMPDH1P20839 514 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 KCNA4P22459 653 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 AOAHP28039 575 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CA5AP35218 305 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 GPR1P46091 355 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 SLC1A6P48664 564 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 HK2P52789 917 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 ABCE1P61221 599 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 IRX4P78413 519 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 B4GALNT1Q00973 533 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 SGCGQ13326 291 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 ZNF460Q14592 562 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 PLEKHS1Q5SXH7 462 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 KIAA1161Q6NSJ0 714 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 PNCKQ6P2M8 343 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CYHR1Q6ZMK1 362 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 MICALCLQ6ZW33 695 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 OTOAQ7RTW8 1153 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CACNA2D3Q8IZS8 1091 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 KIRREL3Q8IZU9 778 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CLDN19Q8N6F1 224 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 EEF1AKMT1Q8WVE0 214 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 NUS1Q96E22 293 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 SEC16BQ96JE7 1060 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 MECRQ9BV79 373 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 BOCQ9BWV1 1114 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 C1QTNF7Q9BXJ2 289 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 FAM126AQ9BYI3 521 aaPredicted RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 MKRN2Q9H000 416 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 PREBQ9HCU5 417 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 ITM2CQ9NQX7 267 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 FGFR1OP2Q9NVK5 253 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 GALPQ9UBC7 116 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 CNOT6Q9ULM6 557 aaKnown RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 GPR34Q9UPC5 381 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
DDX41-203ENST00000504781 COL4A2P08572 1712 aa10.01□□□□□ -0.81
DDX41-203ENST00000504781 PLXNB3Q9ULL4 1909 aa10□□□□□ -0.81
DDX41-203ENST00000504781 C17orf113A0A1B0GUU1 675 aa10□□□□□ -0.81
DDX41-203ENST00000504781 A0A1W2PP55 124 aa10□□□□□ -0.81
DDX41-203ENST00000504781 KRBA1A5PL33 1030 aa10□□□□□ -0.81
DDX41-203ENST00000504781 KLHL33A6NCF5 533 aa10□□□□□ -0.81
DDX41-203ENST00000504781 IGLON5A6NGN9 336 aa10□□□□□ -0.81
DDX41-203ENST00000504781 IQCF5A8MTL0 148 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms