RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SNX6Q9UNH7 406 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ASPDHA6ND91 283 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 SLC1A7O00341 560 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 DCLK1O15075 740 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 RGS5O15539 181 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 DFNA5O60443 496 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 UGT2B11O75310 529 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 RFPL2O75678 378 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 MLYCDO95822 493 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 EFNA1P20827 205 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 IL12AP29459 219 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 WEE1P30291 646 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 NUDT6P53370 316 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ARPC4P59998 168 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 OR4D1Q15615 310 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 C18orf21Q32NC0 220 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 FBXO47Q5MNV8 452 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 WSCD1Q658N2 575 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 CCBE1Q6UXH8 406 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 RFPL4BQ6ZWI9 263 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ISCA2Q86U28 154 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 P2RY8Q86VZ1 359 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ANKRD46Q86W74 232 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 FAM126BQ8IXS8 530 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 TP53I13Q8NBR0 393 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 ADAMTS16Q8TE57 1224 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 WNT8BQ93098 351 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 TOP1MTQ969P6 601 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 TBATAQ96M53 351 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 CTRCQ99895 268 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 HOPXQ9BPY8 73 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 OSBPL10Q9BXB5 764 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 WDR12Q9GZL7 423 aaKnown RBP7.55□□□□□ -1.2
NEDD9-208ENST00000504387 AKIP1Q9NQ31 210 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 STAP1Q9ULZ2 295 aa7.55□□□□□ -1.2
NEDD9-208ENST00000504387 PDZK1P1A8MUH7 402 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 M0R129 80 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PRMT5O14744 637 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 FFAR3O14843 346 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SLC22A2O15244 555 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GPR42O15529 346 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CPNE6O95741 557 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF682O95780 498 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MT-ND2P03891 347 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ALPLP05186 524 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CD36P16671 472 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CCR1P32246 355 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ICAM3P32942 547 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ALDH3A2P51648 485 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HK2P52789 917 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CAMK2BQ13554 666 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SKIV2LQ15477 1246 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GRIK4Q16099 956 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PKDCCQ504Y2 493 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 KCTD11Q693B1 232 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LCN8Q6JVE9 175 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PDZD4Q76G19 769 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 DCP1BQ8IZD4 617 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ATPAF2Q8N5M1 289 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TERB1Q8NA31 727 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 OSCP1Q8WVF1 389 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ISL2Q96A47 359 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ZUFSPQ96AP4 578 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LGALS12Q96DT0 336 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CNGB3Q9NQW8 809 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM9Q9P0T7 183 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ENPP5Q9UJA9 477 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF451Q9Y4E5 1061 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PCDHA9Q9Y5H5 950 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TTC3P53804 2025 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ANKRD31Q8N7Z5 1873 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LOC100130705A0A1B0GUX0 176 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ILVBLA1L0T0 632 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CASTOR2A6NHX0 329 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 hCG_2039718K7EN88 272 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TREHO43280 583 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TSPAN1O60635 241 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SLC22A3O75751 556 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PRSS23O95084 383 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 C22orf31O95567 290 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HMBSP08397 361 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TGFB3P10600 412 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HADHAP40939 763 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CD86P42081 329 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ARCN1P48444 511 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 POLR2JP52435 117 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 FAM189BP81408 668 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 INCA1Q0VD86 236 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TSNQ15631 228 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 FAM98BQ52LJ0 330 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 RIOX2Q8IUF8 465 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 FAM217AQ8IXS0 508 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms