RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 NXPE1Q8N323 547 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 OXR1Q8N573 874 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 OR56A4Q8NGH8 313 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 OR4L1Q8NH43 312 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 PYROXD1Q8WU10 500 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 UBXN4Q92575 508 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 WDR83Q9BRX9 315 aaKnown RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 GTPBP2Q9BX10 602 aaKnown RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 ZDHHC5Q9C0B5 715 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 CATSPERZQ9NTU4 200 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUP54-203ENST00000504173 TMPRSS11EQ9UL52 423 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 NFU1Q9UMS0 254 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 TMEM98Q9Y2Y6 226 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 V9GYY5 206 aaPredicted RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 TMEM202A6NGA9 273 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ENO4A6NNW6 628 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 GOLGA8KD6RF30 607 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 GOLGA8TH3BQL2 631 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CD3EAPO15446 510 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 MTX2O75431 263 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 RASGRP1O95267 797 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CER1O95813 267 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 PRSS56P0CW18 603 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 MSH3P20585 1137 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ACRV1P26436 265 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ARNTP27540 789 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ECHS1P30084 290 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CA5AP35218 305 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 PPARGP37231 505 aaPredicted RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 MAGEA4P43358 317 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CCR10P46092 362 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 POLD2P49005 469 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 BLKP51451 505 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 PPARDQ03181 441 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 EIF2B5Q13144 721 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 CBLBQ13191 982 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 THOC5Q13769 683 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 GTF2H3Q13889 308 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 LONRF1Q17RB8 773 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ZNF542PQ5EBM4 170 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 AARS2Q5JTZ9 985 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 LYPLAL1Q5VWZ2 237 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 STEAP4Q687X5 459 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 UNC5AQ6ZN44 842 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CAPN12Q6ZSI9 719 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 MARK2Q7KZI7 788 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 HID1Q8IV36 788 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 MINDY1Q8N5J2 469 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 DDHD1Q8NEL9 900 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 OR1E3Q8WZA6 343 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 TSACCQ96A04 125 aaPredicted RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 DCUN1D1Q96GG9 259 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 SGSM3Q96HU1 749 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 TTC25Q96NG3 672 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CAMK1GQ96NX5 476 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 TTC1Q99614 292 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 COPS8Q99627 209 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 TSPYL1Q9H0U9 437 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ERVMER34-1Q9H9K5 563 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 TRIM39Q9HCM9 518 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 CYP4F12Q9HCS2 524 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 FGF22Q9HCT0 170 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 C20orf96Q9NUD7 363 aaPredicted RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 ZDHHC3Q9NYG2 299 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 KCNK4Q9NYG8 393 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 IL1RAPL1Q9NZN1 696 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 VPS18Q9P253 973 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 ATXN10Q9UBB4 475 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 SLC17A4Q9Y2C5 497 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 OAS3Q9Y6K5 1087 aaKnown RBP9.91□□□□□ -0.82
NUP54-203ENST00000504173 FAM169AQ9Y6X4 670 aa9.91□□□□□ -0.82
NUP54-203ENST00000504173 TP53BP1Q12888 1972 aaPredicted RBP9.9□□□□□ -0.82
NUP54-203ENST00000504173 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 RELNP78509 3460 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 TRBV5-4A0A0C4DH59 114 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 PRSS38A1L453 326 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 AGAP14A8MT82 685 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 GPR89AB7ZAQ6 455 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 H3BM21 787 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 TNFRSF10CO14798 259 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 VEGFDO43915 354 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 SH3BP5O60239 455 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 CBFA2T3O75081 653 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 TNFP01375 233 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 CEACAM5P06731 702 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 IVLP07476 585 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 GPR89BP0CG08 455 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 RALBP11234 206 aa9.9□□□□□ -0.82
NUP54-203ENST00000504173 NME1P15531 152 aaKnown RBP9.9□□□□□ -0.82
NUP54-203ENST00000504173 JUNDP17535 347 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms