RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SGK2Q9HBY8 427 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 PDP1Q9P0J1 537 aaPredicted RBP16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 ASF1AQ9Y294 204 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 PLK4O00444 970 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 NDUFB5O43674 189 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 CCNYL3P0C7X3 344 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 PTPN2P17706 415 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 RCVRNP35243 200 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ACTR3P61158 418 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 LDB1Q86U70 411 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 EEF1AKMT1Q8WVE0 214 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 SUSD3Q96L08 255 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ERAL1O75616 437 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 KELP23276 732 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 HNF4AP41235 474 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 PEX6Q13608 980 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ADGRE1Q14246 886 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 KIAA0930Q6ICG6 404 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 FAM220AQ7Z4H9 259 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 BEND7Q8N7W2 519 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 NAT16Q8N8M0 369 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 CMASQ8NFW8 434 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 NUSAP1Q9BXS6 441 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 BCO2Q9BYV7 579 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ASB3Q9Y575 518 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ZFP37Q9Y6Q3 630 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 NDUFS2O75306 463 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 FADS2O95864 444 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 DNTTP04053 509 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 SPAM1P38567 509 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 TCEA2Q15560 299 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 RFTN2Q52LD8 501 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 NDOR1Q9UHB4 597 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 MRPS7Q9Y2R9 242 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 MYH2Q9UKX2 1941 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 SLC28A2O43868 658 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 MT-CYBP00156 380 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 APODP05090 189 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ENO2P09104 434 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 MYL9P24844 172 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 AQP4P55087 323 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 SLC39A4Q6P5W5 647 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 ATG14Q6ZNE5 492 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 FAM92BQ6ZTR7 304 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 CHSY3Q70JA7 882 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 COMMD2Q86X83 199 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 CPNE8Q86YQ8 564 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 STYXL1Q9Y6J8 313 aa16.01■□□□□ 0.15
HMGXB3-202ENST00000503427 FAM149AA5PLN7 773 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 CACNB4O00305 520 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 HIST1H2ABP04908 130 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 UGT2B4P06133 528 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 BUD31P41223 144 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 MANFP55145 182 aaKnown RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 SIM2Q14190 667 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 NEK5Q6P3R8 708 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 HIST3H2AQ7L7L0 130 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 CXXC5Q7LFL8 322 aaKnown RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 HIST1H2ACQ93077 130 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 RAB23Q9ULC3 237 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 GPSM3Q9Y4H4 160 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 INSIG1O15503 277 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 IRAK2O43187 625 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PRNPP04156 253 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 FABP3P05413 133 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 ITPKAP23677 461 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 GALK1P51570 392 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 TAS2R39P59534 338 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PAOXQ6QHF9 649 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 RAVER1Q8IY67 606 aaKnown RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 PARP8Q8N3A8 854 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 HMCESQ96FZ2 354 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 MIOSQ9NXC5 875 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 GDAP2Q9NXN4 497 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 CCDC189A1A4V9 331 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 CA9Q16790 459 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PNPT1Q8TCS8 783 aaKnown RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 DCAKDQ8WVC6 231 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 ZNF317Q96PQ6 595 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 EBF3Q9H4W6 596 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 TLR6Q9Y2C9 796 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 CPQQ9Y646 472 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 METTL18O95568 372 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PRKAR1AP10644 381 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 CCT3P49368 545 aaKnown RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 GDF6Q6KF10 455 aaPredicted RBP16■□□□□ 0.15
HMGXB3-202ENST00000503427 CHST9Q7L1S5 443 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PHC3Q8NDX5 983 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 AZIN2Q96A70 460 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 AASDHPPTQ9NRN7 309 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 PTTG2Q9NZH5 202 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 HMGXB4Q9UGU5 601 aa16■□□□□ 0.15
HMGXB3-202ENST00000503427 ANGPTL1O95841 491 aa15.99■□□□□ 0.15
HMGXB3-202ENST00000503427 GOT2P00505 430 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms