RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LMAN1P49257 510 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 VEGFCP49767 419 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PDLIM4P50479 330 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 STAT2P52630 851 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ART1P52961 327 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CLDN20P56880 219 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRT83P78385 493 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMF1P82094 1093 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ROR1Q01973 937 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CALD1Q05682 793 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 SPOCK1Q08629 439 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 MYLK3Q32MK0 819 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 IGSF11Q5DX21 431 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 GPR139Q6DWJ6 353 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 LCN10Q6JVE6 187 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM122CQ6P4D5 195 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PAPD4Q6PIY7 484 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 BRAT1Q6PJG6 821 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CCNI2Q6ZMN8 369 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 GPR180Q86V85 440 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZSCAN30Q86W11 494 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNAAF5Q86Y56 855 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 MCEMP1Q8IX19 187 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CHCHD4Q8N4Q1 142 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 EMC1Q8N766 993 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF114Q8NC26 417 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ACVR1CQ8NER5 493 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 APPL2Q8NEU8 664 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR5R1Q8NH85 324 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 UTP15Q8TED0 518 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 DUSP19Q8WTR2 217 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRPF31Q8WWY3 499 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CEP295NLQ96MC4 621 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 GCNAQ96QF7 691 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ABHD1Q96SE0 405 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCYT2Q99447 389 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 DDOQ99489 341 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 KIFC3Q9BVG8 833 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 APOL6Q9BWW8 343 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 TM6SF1Q9BZW5 370 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 KLHL4Q9C0H6 718 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 IL25Q9H293 177 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CWC25Q9NXE8 425 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 MCM9Q9NXL9 1143 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CPSF2Q9P2I0 782 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 NFKBIL1Q9UBC1 381 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNAJB4Q9UDY4 337 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCNS2Q9ULS6 477 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PADI3Q9ULW8 664 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLAGL1Q9UM63 463 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 PDS5AQ29RF7 1337 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 LOC100509620A0A075B734 347 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 LNP1A1A4G5 178 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM8BA6NDV4 472 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 GLOD5A6NK44 160 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SRRM3A6NNA2 597 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 MID1O15344 667 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZBTB43O43298 467 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 DKC1O60832 514 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF217O75362 1048 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRT36O76013 467 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZBTB11O95625 1053 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 GH2P01242 217 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNTTP04053 509 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 LINC00271P0C7V0 271 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TRIM21P19474 475 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 S1PR1P21453 382 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 HRH2P25021 359 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 CORO1AP31146 461 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMPOP42166 694 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 BRWD1-AS2P59051 145 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SEC61A1P61619 476 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TUBA1BP68363 451 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 DLG1Q12959 904 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TNFAIP1Q13829 316 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRT33BQ14525 404 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 MEP1AQ16819 746 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 C15orf59Q2T9L4 293 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRTCAP3Q53RY4 240 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 GARNL3Q5VVW2 1013 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 NAA16Q6N069 864 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 CREB3L2Q70SY1 520 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRPF39Q86UA1 669 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 CEP97Q8IW35 865 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAP7D3Q8IWC1 876 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ODF3L1Q8IXM7 274 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 RNF113BQ8IZP6 322 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SYT2Q8N9I0 419 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 AVL9Q8NBF6 648 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 MCUQ8NE86 351 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SPATA22Q8NHS9 363 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 LMO3Q8TAP4 145 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC20A1Q8WUM9 679 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC44A1Q8WWI5 657 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNAAF4Q8WXU2 420 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ATP6V1E2Q96A05 226 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM19Q96HH6 336 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 QRFPRQ96P65 431 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 BAG1Q99933 345 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms