RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 BRINP1O60477 761 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 RPL10P27635 214 aaKnown RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 NPY2RP49146 381 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 GABREP78334 506 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 BASP1P80723 227 aaKnown RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 CDK16Q00536 496 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 CACNG1Q06432 222 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 LRRK1Q38SD2 2015 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 CCDC38Q502W7 563 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 ZRANB3Q5FWF4 1079 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 FNBP1LQ5T0N5 605 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 METRNLQ641Q3 311 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 TAS2R42Q7RTR8 314 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 B3GNT8Q7Z7M8 397 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 FGF11Q92914 225 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 TMEM159Q96B96 161 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 AHCYL2Q96HN2 611 aaKnown RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 LINC00615Q96LM1 132 aaPredicted RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 DPYSL5Q9BPU6 564 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 FOXP3Q9BZS1 431 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 RDH14Q9HBH5 336 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 ZDHHC3Q9NYG2 299 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 SCHIP1Q9P0W5 487 aaPredicted RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 ZNF624Q9P2J8 865 aaPredicted RBP12.75□□□□□ -0.37
RACK1-202ENST00000502548 SATB2Q9UPW6 733 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
RACK1-202ENST00000502548 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 IGLV3-16A0A075B6K0 115 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 MGAT4DA6NG13 374 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 VIPP01282 170 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 KRT14P02533 472 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 ATP1B2P14415 290 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 BRAFP15056 766 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 RBMS1P29558 406 aaKnown RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 SLC19A1P41440 591 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 CDKN1CP49918 316 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 ARSDP51689 593 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 ERVPABLB-1P60509 514 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 UBE2IP63279 158 aaKnown RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 CLCA4Q14CN2 919 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 TRIP13Q15645 432 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 TBC1D25Q3MII6 688 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 BCL7AQ4VC05 210 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 C3orf38Q5JPI3 329 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 PCID2Q5JVF3 399 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 TSTD2Q5T7W7 516 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 NKAIN2Q5VXU1 208 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 TTC27Q6P3X3 843 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 ZNF574Q6ZN55 896 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 DET1Q7L5Y6 550 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 TMPRSS9Q7Z410 1059 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 SERPINA9Q86WD7 417 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 FBXO39Q8N4B4 442 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 BEND7Q8N7W2 519 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 OR2L2Q8NH16 312 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 OR10G6Q8NH81 332 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 PEX13Q92968 403 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 PRR11Q96HE9 360 aaPredicted RBP12.74□□□□□ -0.37
RACK1-202ENST00000502548 CMKLR1Q99788 373 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 BFARQ9NZS9 450 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
RACK1-202ENST00000502548 C17orf113A0A1B0GUU1 675 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 PLD2O14939 933 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 ZNF185O15231 689 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SGTAO43765 313 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 TPSB2P20231 275 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 ACRV1P26436 265 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 HALP42357 657 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 MLLT3P42568 568 aaPredicted RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 LIMK2P53671 638 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 EPHA4P54764 986 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 DRG2P55039 364 aaKnown RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 SESN2P58004 480 aaPredicted RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 GNG11P61952 73 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SARNPP82979 210 aaKnown RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 CFHR1Q03591 330 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 ACVR1Q04771 509 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 GPS1Q13098 491 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 TRA2AQ13595 282 aaKnown RBP eCLIP12.73□□□□□ -0.372e-50■■■■■ 46.9
RACK1-202ENST00000502548 NFE2L1Q14494 772 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 MAP9Q49MG5 647 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 TMEM71Q6P5X7 295 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms