RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MAGEB3O15480 346 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CYTIPO60759 359 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CRCPO75575 148 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 HOXD9P28356 352 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CTGFP29279 349 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CCND3P30281 292 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TPTEP56180 551 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 RAC3P60763 192 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 HNRNPKP61978 463 aaKnown RBP eCLIP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CXADRP78310 365 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 PSG6Q00889 435 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 PRKCZQ05513 592 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SLC18A2Q05940 514 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 MESP2Q0VG99 397 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 HSPB3Q12988 150 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 RAPSNQ13702 412 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 KRT33BQ14525 404 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 PKN1Q16512 942 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 UGP2Q16851 508 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TAF1BQ53T94 588 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CAVIN4Q5BKX8 364 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TEDDM1Q5T9Z0 273 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 VWA5B1Q5TIE3 1220 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 STRIP1Q5VSL9 837 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TMEM268Q5VZI3 342 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TBC1D9BQ66K14 1250 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 B3GNTL1Q67FW5 361 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TXNRD3NBQ6F5E7 133 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 RAET1GQ6H3X3 334 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 FBXO42Q6P3S6 717 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 FAM198BQ6UWH4 519 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 KLBQ86Z14 1044 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 EGFL6Q8IUX8 553 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CDH26Q8IXH8 852 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CFAP206Q8IYR0 622 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TXNDC5Q8NBS9 432 aaKnown RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SLC24A4Q8NFF2 622 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CAGE1Q8TC20 777 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 ARHGAP45Q92619 1136 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 NSMAFQ92636 917 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 LENG9Q96B70 501 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 NACC2Q96BF6 587 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 DTD2Q96FN9 168 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 EGLN2Q96KS0 407 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 MUS81Q96NY9 551 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TBCDQ9BTW9 1192 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 FRMD8Q9BZ67 464 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 EQTNQ9NQ60 294 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 DDX18Q9NVP1 670 aaKnown RBP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
BRCA1-224ENST00000497488 TAS2R14Q9NYV8 317 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 OR6C3Q9NZP0 311 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SEMA5BQ9P283 1151 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 MAD2L2Q9UI95 211 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 FBXO4Q9UKT5 387 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 AMFRQ9UKV5 643 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SH2B3Q9UQQ2 575 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 KCNK6Q9Y257 313 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CLIC4Q9Y696 253 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SQORQ9Y6N5 450 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 A2MP01023 1474 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 ARHGEF5Q12774 1597 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 ZNF335Q9H4Z2 1342 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 FGD6Q6ZV73 1430 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 MIA2Q96PC5 1412 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 PTPN23Q9H3S7 1636 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 A0A0A0MQY5 61 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 CTAGE15A4D2H0 777 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 ARHGAP42A6NI28 874 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 HSPB2A8KAH6 182 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 TO15178 435 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 BBOX1O75936 387 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 OR6B1O95007 311 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 LCATP04180 440 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 KRT6BP04259 564 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 INHBBP09529 407 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 SBK2P0C263 348 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 CTAGE8P0CG41 777 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 PCNAP12004 261 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 GLRA2P23416 452 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 AZGP1P25311 298 aaKnown RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 TKTP29401 623 aaKnown RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 APOBEC3AP31941 199 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 PRCPP42785 496 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 KRT6CP48668 564 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 TRPC1P48995 793 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 ZNF84P51523 738 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 DLX2Q07687 328 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 SPOCK1Q08629 439 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 SNX1Q13596 522 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 ZKSCAN8Q15776 578 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 HSPB2Q16082 182 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 SOWAHAQ2M3V2 549 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 FAM98BQ52LJ0 330 aaKnown RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 EPC2Q52LR7 807 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 PDCD4Q53EL6 469 aaKnown RBP6.01□□□□□ -1.45
BRCA1-224ENST00000497488 ZNF618Q5T7W0 954 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 OR6B2Q6IFH4 312 aa6.01□□□□□ -1.45
BRCA1-224ENST00000497488 PODNL1Q6PEZ8 512 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms