RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	KLHL6	Q8WZ60	621 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	C5orf34	Q96MH7	638 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	CSPG4P5	Q96PW8	444 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	TDRD1	Q9BXT4	1180 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	POLR1E	Q9GZS1	481 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	CARD9	Q9H257	536 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	CHST8	Q9H2A9	424 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	FAM83D	Q9H4H8	585 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	RMI1	Q9H9A7	625 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	PDE7B	Q9NP56	450 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	MLXIPL	Q9NP71	852 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	PARVA	Q9NVD7	372 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ASF1B	Q9NVP2	202 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	PPIL1	Q9Y3C6	166 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF451	Q9Y4E5	1061 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	PCSK5	Q92824	1860 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	TMEM191C	A6NGB0	347 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	WIPF3	A6NGB9	483 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393		F5H423	210 aa	Predicted RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	TOX3	O15405	576 aa	Predicted RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	MFSD11	O43934	449 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	DPM1	O60762	260 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	SLC25A14	O95258	325 aa	Predicted RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	TPM2	P07951	284 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PIRT	P0C851	137 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PRF1	P14222	555 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	BRAF	P15056	766 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	XRCC1	P18887	633 aa	Predicted RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	ELAVL4	P26378	380 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	HNRNPH3	P31942	346 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	HCAR3	P49019	387 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	ARL4D	P49703	201 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	CDK18	Q07002	472 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	GPS2	Q13227	327 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	LAMB3	Q13751	1172 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	GALNT3	Q14435	633 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	GPR19	Q15760	415 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	KYNU	Q16719	465 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	RALGPS1	Q5JS13	557 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PRAMEF17	Q5VTA0	474 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PAPD7	Q5XG87	772 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	TXNRD3NB	Q6F5E7	133 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PLEKHA7	Q6IQ23	1121 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	POLN	Q7Z5Q5	900 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	ADGRG6	Q86SQ4	1221 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	NLRP8	Q86W28	1048 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	TMEM126B	Q8IUX1	230 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	CISD2	Q8N5K1	135 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	AOPEP	Q8N6M6	819 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	ENDOV	Q8N8Q3	282 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	GPR150	Q8NGU9	434 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PNPLA2	Q96AD5	504 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	CXorf40B	Q96DE9	158 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	SNRNP40	Q96DI7	357 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	ZDHHC12	Q96GR4	267 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	SPATA16	Q9BXB7	569 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	GPR87	Q9BY21	358 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	CLSTN2	Q9H4D0	955 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	UCK1	Q9HA47	277 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PCDH9	Q9HC56	1237 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	FGF21	Q9NSA1	209 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	PKD2L2	Q9NZM6	624 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	MYO1A	Q9UBC5	1043 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	SNX7	Q9UNH6	387 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	FARSA	Q9Y285	508 aa	Known RBP	7.69	□□□□□ -1.18
NVL-223	ENST00000496393	SLC5A6	Q9Y289	635 aa		7.69	□□□□□ -1.18
NVL-223	ENST00000496393	FBN2	P35556	2912 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	POLQ	O75417	2590 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	CPNE3	O75131	537 aa	Known RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	SCRG1	O75711	98 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	TMEM63A	O94886	807 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	RECK	O95980	971 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	PRL	P01236	227 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	HLA-DQB2	P05538	268 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF7	P17097	686 aa	Predicted RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	SERPINB6	P35237	376 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ARCN1	P48444	511 aa	Known RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ITGA1	P56199	1179 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	UBE2H	P62256	183 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	PDE1B	Q01064	536 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	NIPAL4	Q0D2K0	466 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	KRT81	Q14533	505 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	PLCL1	Q15111	1095 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	DPYSL2	Q16555	572 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	QPCT	Q16769	361 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	KHDC1	Q4VXA5	237 aa	Known RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ANKRD20A8P	Q5CZ79	823 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	LCN10	Q6JVE6	187 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	FBXO38	Q6PIJ6	1188 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	LRRTM4	Q86VH4	590 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	PSTK	Q8IV42	348 aa	Known RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	RHOT1	Q8IXI2	618 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	TEX26	Q8N6G2	289 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	SLC38A9	Q8NBW4	561 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ARRDC2	Q8TBH0	407 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	SEC14L1	Q92503	715 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	SLC41A2	Q96JW4	573 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF514	Q96K75	400 aa	Predicted RBP	7.68	□□□□□ -1.18
NVL-223	ENST00000496393	PPM1M	Q96MI6	270 aa		7.68	□□□□□ -1.18
NVL-223	ENST00000496393	RANBP9	Q96S59	729 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms