RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HES6Q96HZ4 224 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 TTC25Q96NG3 672 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 BBC3Q96PG8 261 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 FAM118BQ9BPY3 351 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 DDA1Q9BW61 102 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 CPNE5Q9HCH3 593 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 FOXJ2Q9P0K8 574 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 ARL5AQ9Y689 179 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 HELZ2Q9BYK8 2649 aaKnown RBP15.48■□□□□ 0.07
HDAC4-213ENST00000496347 BOD1L1Q8NFC6 3051 aa15.48■□□□□ 0.07
HDAC4-213ENST00000496347 TLN1Q9Y490 2541 aaKnown RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 GCN1Q92616 2671 aaKnown RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 KLHL33A6NCF5 533 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 B4E171 279 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 C9orf172C9J069 976 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 K7ENP7 123 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 DDX3YO15523 660 aaKnown RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 GPR39O43194 453 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 CRTAMO95727 393 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 AGTP01019 485 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 XRCC1P18887 633 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 TSPAN7P41732 249 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 PPM1FP49593 454 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 MAPK10P53779 464 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 TMEM115Q12893 351 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 GPRC6AQ5T6X5 926 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 INO80CQ6PI98 192 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 ABRAXAS1Q6UWZ7 409 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 ARHGEF18Q6ZSZ5 1173 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 C11orf96Q7Z7L8 435 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 RBM12BQ8IXT5 1001 aaKnown RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 USP7Q93009 1102 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF514Q96K75 400 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 TBL1YQ9BQ87 522 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 TMEM9Q9P0T7 183 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 SLC23A2Q9UGH3 650 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-213ENST00000496347 DNAJC16Q9Y2G8 782 aa15.47■□□□□ 0.07
HDAC4-213ENST00000496347 TRBV23OR9-2A0A075B6M9 112 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 EIF4E1BA6NMX2 242 aaKnown RBP15.46■□□□□ 0.07
HDAC4-213ENST00000496347 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 VIPP01282 170 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 ANKRD34CP0C6C1 535 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 CCL4P13236 92 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 IDSP22304 550 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 AKT1P31749 480 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 SEPT7Q16181 437 aaKnown RBP15.46■□□□□ 0.07
HDAC4-213ENST00000496347 LONRF2Q1L5Z9 754 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 ARHGAP40Q5TG30 622 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 CCDC81Q6ZN84 652 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 TMEM26Q6ZUK4 368 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 AMZ2Q86W34 360 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 PLXDC1Q8IUK5 500 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 SLC35B2Q8TB61 432 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 TAAR9Q96RI9 348 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 ASPSCR1Q9BZE9 553 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 ARNT2Q9HBZ2 717 aa15.46■□□□□ 0.07
HDAC4-213ENST00000496347 ZNF462Q96JM2 2506 aa15.46■□□□□ 0.06
HDAC4-213ENST00000496347 A0A0U1RQJ8 604 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 ARHGAP6O43182 974 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 BUD23O43709 281 aaKnown RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 KRT86O43790 486 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 SRP72O76094 671 aaKnown RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 FGF3P11487 239 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 HADHAP40939 763 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 HALP42357 657 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 MAPK9P45984 424 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 CAPZBP47756 277 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 PARP6Q2NL67 630 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 KCTD11Q693B1 232 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 FAM129CQ86XR2 697 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 DTX1Q86Y01 620 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 RASGEF1AQ8N9B8 481 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 FAM71DQ8N9W8 422 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 OR4K2Q8NGD2 314 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 ULK4Q96C45 1275 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 RTP4Q96DX8 246 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 WBP1Q96G27 269 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 TEFMQ96QE5 360 aaKnown RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 APOL2Q9BQE5 337 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 FRMD8P1Q9BZ68 369 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 LRRC40Q9H9A6 602 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 SCHIP1Q9P0W5 487 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 ZNF624Q9P2J8 865 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 PCDHB11Q9Y5F2 797 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 DNMT3AQ9Y6K1 912 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-213ENST00000496347 PIKFYVEQ9Y2I7 2098 aa15.45■□□□□ 0.06
HDAC4-213ENST00000496347 AGRPO00253 132 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 UBXN7O94888 489 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 BRAFP15056 766 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 MSH3P20585 1137 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 ITGALP20701 1170 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 MPSTP25325 297 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 RPL10P27635 214 aaKnown RBP15.44■□□□□ 0.06
HDAC4-213ENST00000496347 SLC19A1P41440 591 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 CTSCP53634 463 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 MSLNQ13421 630 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-213ENST00000496347 OLIG2Q13516 323 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms