RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HRH2P25021 359 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 STX2P32856 288 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 MC5RP33032 325 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CTNNA1P35221 906 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 AMTP48728 403 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 LIG4P49917 911 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 RAD23AP54725 363 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 HNRNPKP61978 463 aaKnown RBP eCLIP3.66□□□□□ -1.82
CLK1-214ENST00000496205 RUNX1T1Q06455 604 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 GRIK2Q13002 908 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 DECR1Q16698 335 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 AMZ1Q400G9 498 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ATP13A5Q4VNC0 1218 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CCDC92Q53HC0 331 aaPredicted RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 FRG2Q64ET8 278 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 TMEM211Q6ICI0 200 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 PAPD4Q6PIY7 484 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 FAM47EQ6ZV65 393 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 LDB1Q86U70 411 aaPredicted RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 CCDC190Q86UF4 302 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZSCAN30Q86W11 494 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CEP57Q86XR8 500 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZNF595Q8IYB9 648 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZNF34Q8IZ26 560 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CNPY4Q8N129 248 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 PGBD5Q8N414 524 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CLEC18CQ8NCF0 446 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 RBM15BQ8NDT2 890 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 OR6J1Q8NGC5 347 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 GSDMBQ8TAX9 411 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZFAND2BQ8WV99 257 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 TAAR8Q969N4 342 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 VPS33AQ96AX1 596 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 PHF21BQ96EK2 531 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CCDC34Q96HJ3 373 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CNDP2Q96KP4 475 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 OLFM1Q99784 485 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 SH3GL2Q99962 352 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 DCLK3Q9C098 648 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 GPR88Q9GZN0 384 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 OSGEPL1Q9H4B0 414 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 MAGIXQ9H6Y5 334 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 SLC35C2Q9NQQ7 365 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 GDE1Q9NZC3 331 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 IL36RNQ9UBH0 155 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 HACL1Q9UJ83 578 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ACAD8Q9UKU7 415 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 FZD10Q9ULW2 581 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 MYO6Q9UM54 1294 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZNF148Q9UQR1 794 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 TMEM184BQ9Y519 407 aaPredicted RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 PCDHGB1Q9Y5G3 927 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 SCN5AQ14524 2016 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 A0A1W2PP11 408 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 A6NL46 340 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 SRRM3A6NNA2 597 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 MAGEB17A8MXT2 336 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 ANKRD28O15084 1053 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 ASAP2O43150 1006 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 DIAPH2O60879 1101 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 TADA2AO75478 443 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 HSPA4LO95757 839 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 APOA4P06727 396 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 ABCB1P08183 1280 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 DDX5P17844 614 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 UGT1A1P22309 533 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 C21orf33P30042 268 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 PDLIM4P50479 330 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 RAD23BP54727 409 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 CDH13P55290 713 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 ERVFC1-1P60608 527 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 ROR2Q01974 943 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 SNTB1Q13884 538 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 SYT16Q17RD7 645 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 IZUMO4Q1ZYL8 232 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 C15orf59Q2T9L4 293 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 FAM98BQ52LJ0 330 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 KRTCAP3Q53RY4 240 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 FAM76BQ5HYJ3 339 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 C9orf152Q5JTZ5 239 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 C18orf63Q68DL7 685 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 KCTD18Q6PI47 426 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 HAUS6Q7Z4H7 955 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 GALNT13Q8IUC8 556 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 GUF1Q8N442 669 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 SLC38A9Q8NBW4 561 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 TAS1R2Q8TE23 839 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 AFAP1L1Q8TED9 768 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 LPGAT1Q92604 370 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 PTERQ96BW5 349 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 KXD1Q9BQD3 176 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 CCDC106Q9BWC9 280 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 MRPL1Q9BYD6 325 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 KCNK15Q9H427 330 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 C6orf106Q9H6K1 298 aaPredicted RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 OPA3Q9H6K4 179 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 MBNL1Q9NR56 388 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 OLAHQ9NV23 265 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 CWC25Q9NXE8 425 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms