RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SH3BP1Q9Y3L3 701 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ANKRD12Q6UB98 2062 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 OBSL1O75147 1896 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CCDC154A6NI56 674 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 K7ERQ8 282 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 GPR39O43194 453 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 HTRA2O43464 458 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 AHCYL1O43865 530 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 TNFAIP8O95379 198 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 PRAMEF12O95522 483 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 IGSF6O95976 241 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CKMP06732 381 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 FESP07332 822 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 DGKAP23743 735 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 SLC6A2P23975 617 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CREMQ03060 361 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 NFATC2Q13469 925 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 NFYCQ13952 458 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 MPPE1Q53F39 396 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 MPP7Q5T2T1 576 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 FOXB2Q5VYV0 432 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 SLC15A3Q8IY34 581 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 APCDD1Q8J025 514 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CDYL2Q8N8U2 506 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 FNDC5Q8NAU1 212 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 METTL6Q8TCB7 284 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 GRIN3AQ8TCU5 1115 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CNBD2Q96M20 576 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 SEMA6AQ9H2E6 1030 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 MUC13Q9H3R2 512 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ATP13A3Q9H7F0 1226 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 NOL11Q9H8H0 719 aaKnown RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 KIAA1522Q9P206 1035 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 EVLQ9UI08 416 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 LEF1Q9UJU2 399 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 DYTNA2CJ06 578 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 FXYD1O00168 92 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 FFAR2O15552 330 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SYNCRIPO60506 623 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 EEDO75530 441 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 BAIAP3O94812 1187 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CSPG5O95196 566 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF26P17031 533 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 PSMA4P25789 261 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 GABRR2P28476 465 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ZXDBP98169 803 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 TLE2Q04725 743 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 PITRM1Q5JRX3 1037 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CPXM2Q8N436 756 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OR52B6Q8NGF0 335 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OR6K2Q8NGY2 324 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SLCO4A1Q96BD0 722 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 FAM126AQ9BYI3 521 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 RNF208Q9H0X6 261 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 NDUFA13Q9P0J0 144 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ACTR3BQ9P1U1 418 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CRLS1Q9UJA2 301 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 GLYATL1P3A0A0U1RQE8 302 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ABHD14A-ACY1A0A1B0GW23 586 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF839A8K0R7 811 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 C9JVG2 144 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SMAD6O43541 496 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 AKAP10O43572 662 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OTCP00480 354 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 NPPAP01160 153 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 FAM58BPP0C7Q3 252 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 IL10P22301 178 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ACRV1P26436 265 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SERPINA4P29622 427 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 RFC2P35250 354 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CCNHP51946 323 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 POLR2JP52435 117 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ERVPABLB-1P60509 514 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 GTF2H2Q13888 395 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CAPRIN1Q14444 709 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CRY1Q16526 586 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 TRIM60Q495X7 471 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 C6orf136Q5SQH8 315 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 LCN8Q6JVE9 175 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 GTF2H2CQ6P1K8 395 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 FAM117BQ6P1L5 589 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 IL27RAQ6UWB1 636 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SBSNQ6UWP8 590 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 HTR3DQ70Z44 454 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 GOLGA7Q7Z5G4 137 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 AHI1Q8N157 1196 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 PDPRQ8NCN5 879 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OR2T11Q8NH01 316 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CANT1Q8WVQ1 401 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 AUTS2Q8WXX7 1259 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF597Q96LX8 424 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 PLEKHG4BQ96PX9 1271 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CDK15Q96Q40 435 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ACOX2Q99424 681 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OSBPL11Q9BXB4 747 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 SLC52A3Q9NQ40 469 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms