RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 DDA1Q9BW61 102 aa23.85■■□□□ 1.41
HLA-C-209ENST00000495835 ASPSCR1Q9BZE9 553 aa23.85■■□□□ 1.41
HLA-C-209ENST00000495835 POT1Q9NUX5 634 aa23.85■■□□□ 1.41
HLA-C-209ENST00000495835 ZNF106Q9H2Y7 1883 aaKnown RBP23.85■■□□□ 1.41
HLA-C-209ENST00000495835 KALRNO60229 2985 aa23.85■■□□□ 1.41
HLA-C-209ENST00000495835 CRTAMO95727 393 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 VIPP01282 170 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 CCL4P13236 92 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 PSMB4P28070 264 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 RAB15P59190 212 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 AADACL2Q6P093 401 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 FAM151BQ6UXP7 276 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 ZNF761Q86XN6 746 aaPredicted RBP23.84■■□□□ 1.41
HLA-C-209ENST00000495835 PLXDC1Q8IUK5 500 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 TRAPPC5Q8IUR0 188 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 ZNF398Q8TD17 642 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 SLC39A7Q92504 469 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 HES6Q96HZ4 224 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 ZMYND15Q9H091 742 aa23.84■■□□□ 1.41
HLA-C-209ENST00000495835 GAPDHSO14556 408 aaPredicted RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 DDX3YO15523 660 aaKnown RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A9O60656 530 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A6P19224 532 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A1P22309 533 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A4P22310 534 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A3P35503 534 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 SLC19A1P41440 591 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 PPM1FP49593 454 aaPredicted RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 KLF1Q13351 362 aaPredicted RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 PARP6Q2NL67 630 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 TMEM26Q6ZUK4 368 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 AMZ2Q86W34 360 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 TRIM48Q8IWZ4 208 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 SPC24Q8NBT2 197 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 NCSTNQ92542 709 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 TEFMQ96QE5 360 aaKnown RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 TSGA10Q9BZW7 698 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A7Q9HAW7 530 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A10Q9HAW8 530 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 UGT1A8Q9HAW9 530 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 TMEM9Q9P0T7 183 aa23.83■■□□□ 1.41
HLA-C-209ENST00000495835 ZNF624Q9P2J8 865 aaPredicted RBP23.83■■□□□ 1.41
HLA-C-209ENST00000495835 PDZK1P1A8MUH7 402 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 STMND1H3BQB6 276 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 TOX3O15405 576 aaPredicted RBP23.82■■□□□ 1.4
HLA-C-209ENST00000495835 HADHAP40939 763 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 GSDMDP57764 484 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 MSLNQ13421 630 aaPredicted RBP23.82■■□□□ 1.4
HLA-C-209ENST00000495835 GPRC6AQ5T6X5 926 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 CCDC110Q8TBZ0 833 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 ZPBPQ9BS86 351 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 DESI2Q9BSY9 194 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 FOXJ2Q9P0K8 574 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 SCHIP1Q9P0W5 487 aaPredicted RBP23.82■■□□□ 1.4
HLA-C-209ENST00000495835 DNAJC16Q9Y2G8 782 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 ARL5AQ9Y689 179 aa23.82■■□□□ 1.4
HLA-C-209ENST00000495835 AGAP14A8MT82 685 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 BUD23O43709 281 aaKnown RBP23.81■■□□□ 1.4
HLA-C-209ENST00000495835 PRAMEF1O95521 474 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 ANKRD34CP0C6C1 535 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 BRAFP15056 766 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 HALP42357 657 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 LONRF2Q1L5Z9 754 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 PLA2G4EQ3MJ16 856 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 RASGEF1AQ8N9B8 481 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 OR4K2Q8NGD2 314 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 FAM118BQ9BPY3 351 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 TBL1YQ9BQ87 522 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 FBXO8Q9NRD0 319 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 SLC39A1Q9NY26 324 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 TRIM10Q9UDY6 481 aa23.81■■□□□ 1.4
HLA-C-209ENST00000495835 MN1Q10571 1320 aaPredicted RBP23.81■■□□□ 1.4
HLA-C-209ENST00000495835 PSMD3O43242 534 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 KRT86O43790 486 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 POP7O75817 140 aaKnown RBP23.8■■□□□ 1.4
HLA-C-209ENST00000495835 SRP72O76094 671 aaKnown RBP23.8■■□□□ 1.4
HLA-C-209ENST00000495835 UBXN7O94888 489 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 FTCDO95954 541 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 C9P02748 559 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 MSH3P20585 1137 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 MPSTP25325 297 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 MC2RQ01718 297 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 TGIF1Q15583 401 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 DCAF12Q5T6F0 453 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 DENND5AQ6IQ26 1287 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 TMEM220Q6QAJ8 160 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 ARHGEF18Q6ZSZ5 1173 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 ZFAND4Q86XD8 727 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 BMPERQ8N8U9 685 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 SLC35B2Q8TB61 432 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 HEXDCQ8WVB3 486 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 TBC1D10AQ9BXI6 508 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 FRMD8P1Q9BZ68 369 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-209ENST00000495835 ASB8Q9H765 288 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 SLC40A1Q9NP59 571 aa23.8■■□□□ 1.4
HLA-C-209ENST00000495835 PACSIN2Q9UNF0 486 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-209ENST00000495835 AGRPO00253 132 aa23.79■■□□□ 1.4
HLA-C-209ENST00000495835 EFSO43281 561 aa23.79■■□□□ 1.4
HLA-C-209ENST00000495835 RPL10P27635 214 aaKnown RBP23.79■■□□□ 1.4
HLA-C-209ENST00000495835 STIP1P31948 543 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms