RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 CALUO43852 315 aaPredicted RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 SH3BP5O60239 455 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TLR5O60602 858 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 GJB3O75712 270 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PIAS2O75928 621 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 RTN3O95197 1032 aaPredicted RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 DLATP10515 647 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 IRF1P10914 325 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TSHRP16473 764 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TYRP1P17643 537 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TNNI1P19237 187 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 TNFSF4P23510 183 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 IL1R2P27930 398 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 NTSR1P30989 418 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PPP1R2P41236 205 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 CDH8P55286 799 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 BMPR2Q13873 1038 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 KCNAB1Q14722 419 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TRIP6Q15654 476 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 HSP90AA4PQ58FG1 418 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 HECTD3Q5T447 861 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 SNX30Q5VWJ9 437 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PCSK4Q6UW60 755 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PAQR9Q6ZVX9 377 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TRMT11Q7Z4G4 463 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 C11orf96Q7Z7L8 435 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PNPLA1Q8N8W4 532 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 TERB1Q8NA31 727 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 ATP11CQ8NB49 1132 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 IPO4Q8TEX9 1081 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 XAGE5Q8WWM1 108 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 CCDC127Q96BQ5 260 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 OTUB2Q96DC9 234 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 LRRC46Q96FV0 321 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 ZNF419Q96HQ0 510 aaPredicted RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 TNIP3Q96KP6 325 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 GABRG3Q99928 467 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 ELOVL4Q9GZR5 314 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 CD93Q9NPY3 652 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 SAMSN1Q9NSI8 373 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 IL37Q9NZH6 218 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 RWDD2AQ9UIY3 292 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PTPRDP23468 1912 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 ANAPC1Q9H1A4 1944 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 FAM92AA1XBS5 289 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 WASH3PC4AMC7 463 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 GOLGA6L19H0YKK7 550 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 APOL1O14791 398 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 CETN3O15182 167 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 CCP110O43303 1012 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 THAP12O43422 761 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 ZNF217O75362 1048 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 BEST1O76090 585 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 URI1O94763 535 aaPredicted RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 TBX18O95935 607 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 IL6RP08887 468 aaPredicted RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 CISD3P0C7P0 127 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 ZDHHC11BP0C7U3 371 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 EBLN1P0CF75 366 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 CYP2J2P51589 502 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 MYL6P60660 151 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TNNC1P63316 161 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 FKBP3Q00688 224 aaKnown RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 SLC14A1Q13336 389 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TRPC3Q13507 836 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 HNRNPDQ14103 355 aaKnown RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 SNRNP35Q16560 246 aaKnown RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 ERCC6LQ2NKX8 1250 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 SOWAHCQ53LP3 525 aaPredicted RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 SLC9A4Q6AI14 798 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 FCRL6Q6DN72 434 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TTI2Q6NXR4 508 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 CCNI2Q6ZMN8 369 aaPredicted RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 TPGS1Q6ZTW0 290 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 KIAA1549LQ6ZVL6 1849 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 PKD1L2Q7Z442 2459 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 RABEPKQ7Z6M1 372 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 SRLQ86TD4 932 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 DHX40Q8IX18 779 aaKnown RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 IZUMO1Q8IYV9 350 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 SDR16C5Q8N3Y7 309 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 RNF152Q8N8N0 203 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 ZMIZ2Q8NF64 920 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 ADAMTS14Q8WXS8 1223 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 SLC9A6Q92581 669 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 P2RY11Q96G91 374 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 PDLIM2Q96JY6 352 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 CCDC138Q96M89 665 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 BPIFA3Q9BQP9 254 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 MED10Q9BTT4 135 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 FAM124BQ9H5Z6 455 aaPredicted RBP6.63□□□□□ -1.35
VIM-207ENST00000495528 AGPAT3Q9NRZ7 376 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 DNAJC17Q9NVM6 304 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms