RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	PIH1D2	Q8WWB5	315 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	ALG14	Q96F25	216 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	ACOX2	Q99424	681 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	OSBPL11	Q9BXB4	747 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	CLPB	Q9H078	707 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	EPB41L1	Q9H4G0	881 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	CCM2L	Q9NUG4	571 aa	Predicted RBP	15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	ACTR3B	Q9P1U1	418 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	PCDHGB4	Q9UN71	923 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	LZTS1	Q9Y250	596 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	PCDHGB5	Q9Y5G0	923 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	PCDHA9	Q9Y5H5	950 aa		15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	TNPO3	Q9Y5L0	923 aa	Known RBP	15.16	■□□□□ 0.02
CALD1-222	ENST00000495522	GREM1	O60565	184 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	EED	O75530	441 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TIPRL	O75663	272 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	PGM3	O95394	542 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	S100B	P04271	92 aa	Predicted RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ALPI	P09923	528 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	BMP2	P12643	396 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ZNF7	P17097	686 aa	Predicted RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	PSMC3	P17980	439 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	RPS3	P23396	243 aa	Known RBP eCLIP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	GSTT1	P30711	240 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	RAB33A	Q14088	237 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	GK3P	Q14409	553 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	PCBP2	Q15366	365 aa	Known RBP eCLIP	15.15	■□□□□ 0.02	1e-7	■□□□□ 10.9
CALD1-222	ENST00000495522	THEMIS2	Q5TEJ8	643 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	PTRHD1	Q6GMV3	140 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522		Q6ZNB5	142 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ERMP1	Q7Z2K6	904 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CDYL2	Q8N8U2	506 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ADAMTS19	Q8TE59	1207 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TMEM169	Q96HH4	297 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TEX37	Q96LM6	180 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	C2orf49	Q9BVC5	232 aa	Predicted RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	HERC2P3	Q9BVR0	1158 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	MRPS26	Q9BYN8	205 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TM6SF2	Q9BZW4	377 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	NOL11	Q9H8H0	719 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TMEM45A	Q9NWC5	275 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ZIM2	Q9NZV7	527 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	SUN2	Q9UH99	717 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	APPL1	Q9UKG1	709 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	AK5	Q9Y6K8	562 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	DHRS12	A0PJE2	317 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	C7orf72	A4D263	438 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CCDC154	A6NI56	674 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	AKAP10	O43572	662 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	BAIAP3	O94812	1187 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	PRAMEF1	O95521	474 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CLPTM1	O96005	669 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	RPL5	P46777	297 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ZFP36L2	P47974	494 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ERVPABLB-1	P60509	514 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	UFM1	P61960	85 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ROR2	Q01974	943 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ARHGEF6	Q15052	776 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	RETSAT	Q6NUM9	610 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	FAM151B	Q6UXP7	276 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	SATL1	Q86VE3	508 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	SERPINA9	Q86WD7	417 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CAMK1D	Q8IU85	385 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CHERP	Q8IWX8	916 aa	Known RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ARL14EP	Q8N8R7	260 aa	Predicted RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	OR52B6	Q8NGF0	335 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	GRIN3A	Q8TCU5	1115 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ZFAND2B	Q8WV99	257 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	NCSTN	Q92542	709 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TMEM125	Q96AQ2	219 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	VPS33A	Q96AX1	596 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	SLC45A3	Q96JT2	553 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	ZNF558	Q96NG5	402 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	C1orf50	Q9BV19	199 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	TRIM4	Q9C037	500 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	MUC13	Q9H3R2	512 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	SAGE1	Q9NXZ1	904 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	LEF1	Q9UJU2	399 aa	Predicted RBP	15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	CPQ	Q9Y646	472 aa		15.15	■□□□□ 0.02
CALD1-222	ENST00000495522	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	ASPDH	A6ND91	283 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522		K7ERQ8	282 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	HNRNPR	O43390	633 aa	Known RBP	15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	SYNCRIP	O60506	623 aa	Known RBP	15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	FKTN	O75072	461 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	PSMA4	P25789	261 aa	Known RBP	15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	MAGEA8	P43361	318 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	POLR2J	P52435	117 aa	Known RBP	15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	PRMT2	P55345	433 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	TBC1D25	Q3MII6	688 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	ATP6AP1L	Q52LC2	224 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	TBCEL	Q5QJ74	424 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	C6orf136	Q5SQH8	315 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	LETMD1	Q6P1Q0	360 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	SBSN	Q6UWP8	590 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	SPPL2C	Q8IUH8	684 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	TCEAL8	Q8IYN2	117 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	SLC39A11	Q8N1S5	342 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	TMEM199	Q8N511	208 aa		15.14	■□□□□ 0.01
CALD1-222	ENST00000495522	ZNF513	Q8N8E2	541 aa	Predicted RBP	15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms