RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FTH1P19P0C7X4 201 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 RALBP11234 206 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 CKMT1AP12532 417 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 ATP1B2P14415 290 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 ARCN1P48444 511 aaKnown RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 DNAJC21Q5F1R6 531 aaKnown RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 N4BP2L1Q5TBK1 243 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 OGFOD3Q6PK18 319 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 TMEM135Q86UB9 458 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 CLDN19Q8N6F1 224 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 ARL10Q8N8L6 244 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 WDR83Q9BRX9 315 aaKnown RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 CARD6Q9BX69 1037 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 OSGEPL1Q9H4B0 414 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 PRDM8Q9NQV8 689 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 WHRNQ9P202 907 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 TBC1D29Q9UFV1 150 aa19.14■□□□□ 0.65
HDAC4-212ENST00000495497 ARID1BQ8NFD5 2236 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-212ENST00000495497 ZCWPW2A0A1B0GU75 182 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 ESYT3A0FGR9 886 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 CPED1A4D0V7 1026 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 CFAP99D6REC4 459 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 SMAPO00193 183 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 F7P08709 466 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-212ENST00000495497 ACADVLP49748 655 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 MAZP56270 477 aaKnown RBP19.13■□□□□ 0.65
HDAC4-212ENST00000495497 CALCOCO2Q13137 446 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 NR0B2Q15466 257 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 KIAA0930Q6ICG6 404 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-212ENST00000495497 GUSBP11Q6P575 273 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 UNC5BQ8IZJ1 945 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 NAGSQ8N159 534 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 PDIK1LQ8N165 341 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 OTUD6BQ8N6M0 293 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 BBOF1Q8ND07 529 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 GPR156Q8NFN8 814 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 GLMNQ92990 594 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.13■□□□□ 0.651e-8■■■■■ 68.8
HDAC4-212ENST00000495497 EBNA1BP2Q99848 306 aaKnown RBP19.13■□□□□ 0.65
HDAC4-212ENST00000495497 TIMM29Q9BSF4 260 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 RAB17Q9H0T7 212 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 FAM8A1Q9UBU6 413 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 PADI4Q9UM07 663 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 CHMP2BQ9UQN3 213 aa19.13■□□□□ 0.65
HDAC4-212ENST00000495497 ACP1P24666 158 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 ELK3P41970 407 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 ARL4CP56559 192 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 SEPT7Q16181 437 aaKnown RBP19.12■□□□□ 0.65
HDAC4-212ENST00000495497 HIF1AQ16665 826 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 BCL7AQ4VC05 210 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 PERM1Q5SV97 790 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 FAM83HQ6ZRV2 1179 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-212ENST00000495497 EFL1Q7Z2Z2 1120 aaKnown RBP19.12■□□□□ 0.65
HDAC4-212ENST00000495497 ANKMY2Q8IV38 441 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 CEP112Q8N8E3 955 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 HEXDCQ8WVB3 486 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 SGSM3Q96HU1 749 aa19.12■□□□□ 0.65
HDAC4-212ENST00000495497 COL5A1P20908 1838 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PRR19A6NJB7 356 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PCNX2A6NKB5 2137 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 CASC3O15234 703 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 USP1O94782 785 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PGAM1P18669 254 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PAMP19021 973 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 RPL10P27635 214 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 DRG2P55039 364 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PLTPP55058 493 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 CLDN6P56747 220 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PDIA2Q13087 525 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 NFE2L1Q14494 772 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 ITIH4Q14624 930 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 FASTKD3Q14CZ7 662 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 C14orf28Q4W4Y0 310 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 LYPLAL1Q5VWZ2 237 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 ARMC3Q5W041 872 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 ZDHHC24Q6UX98 284 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 AMZ2Q86W34 360 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 IFI44Q8TCB0 444 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 ART4Q93070 314 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 CFAP36Q96G28 342 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 PLAC1Q9HBJ0 212 aa19.11■□□□□ 0.65
HDAC4-212ENST00000495497 SCHIP1Q9P0W5 487 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 DMGDHQ9UI17 866 aaKnown RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 DNMT3AQ9Y6K1 912 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-212ENST00000495497 SPTBN4Q9H254 2564 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 EME2A4GXA9 379 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 A6NCN8 305 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 ZNF500O60304 480 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 RFPL3O75679 317 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 POLBP06746 335 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 NSG1P42857 185 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 RPIAP49247 311 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 PRLHRP49683 370 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 DUSP3P51452 185 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 CLCNKAP51800 687 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 GUCY2DQ02846 1103 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 HLTFQ14527 1009 aaKnown RBP eCLIP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 CRYMQ14894 314 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 NEPROQ6NW34 567 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 XKR5Q6UX68 686 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms